Microbacterium sp. BH-3-3-3: BJP65_06615
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Entry
BJP65_06615 CDS
T04827
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BJP65_06615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mih03021
]
BJP65_06615
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_06615
Enzymes [BR:
mih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BJP65_06615
Transcription machinery [BR:
mih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BJP65_06615
DNA repair and recombination proteins [BR:
mih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BJP65_06615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF1690
Motif
Other DBs
NCBI-ProteinID:
AOX45524
UniProt:
A0AAC9IAH9
LinkDB
All DBs
Position
complement(1416588..1420463)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLESTTFDQIRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEDARHRDLAMQENNIRLELKTLGDRRDARIAARLAKLEEE
LAALEAEGAKADQKKKVKDAAEKEMTATRKGADEQIAKLERVWEDFRTLEVGALKPEDDV
FHELQDRFGQYFEAHMGAESIKRRLEIFDLAAESENLHLQISEGKGQRKIRAIKRLKVVN
SFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERFR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTLKEGASGEGR
AFGSVGEAILAKDEGTLDLQAKARIRIPGLTFLEGQAPEGYEKHGLVDASLGQAIFNDTL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDIL
TPPNKGEIVAGYEKQAAKVQAQYEKGLTTDAERRQELIKIWTEATDEVQKAMRDNFPADN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTSKGLELPIAAADSSGALVMDANVE
NSVFARTLATEVVDAQGTVLAEAGDDVGDVLIDKLVAGGIESIKVRSVLTCDSAVGVCAK
CYGRSLATGKIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIDETDKAKKVILTPDNGDEPVVYPVLKRATLLVEDGQHVSV
GEPLQVGTLDPKEVMRVQGAREVQKYLVNGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHADTDLLPGELVDFKRYQNINRAAVGEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVTVEATEEAKSERYPNRI
FASDGAYSDADLSYVDFDSFSSDDFTPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaatcaaccacttttgatcagatccgtatcggtctggccaccgccgacgacatc
cgtcgttggtccttcggtgaggtcaagaagcccgagacgatcaactaccgcacgctgaag
cccgagaaggacggcctgttcggcgagcagatcttcgggccctcccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgtcgcgagcgcatgggccacatcgagctcgccgcgccc
gtcacgcacatctggtacttcaagggcgtcccctcgcgcttgggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatggtgatctcggtcgac
gaagatgctcgtcaccgcgacctcgccatgcaggagaacaacatccgcctcgagctgaag
acgctcggcgaccgccgcgatgcccgcatcgccgcccgcctggccaagctcgaagaggaa
ctcgccgccctcgaggcggaaggcgccaaggccgaccagaagaagaaggtcaaggacgcc
gccgagaaagagatgacggccacccgcaagggtgccgacgagcagatcgccaagctggag
cgcgtgtgggaagacttccgcacgctcgaggtcggtgccctgaagcccgaggacgacgtc
ttccacgagctgcaggaccgcttcggtcagtacttcgaggcccacatgggcgcggagtcg
atcaagcgtcgcctcgagatcttcgacctggccgccgagagcgagaacctgcacctgcag
atctccgagggcaagggccagcgcaagatccgcgcgatcaagcgactcaaggtcgtcaac
tcgttcctgcagaccggcatgtcgccggcctccatggtgctcgacgtcgttccggtgatc
ccgccggagctgcgtcccatggtgcagctcgacggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgcctccgtcgtctgatcgatctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggtcgccccgtcaccggtaccggcaaccgcgccctgaag
tccctgagcgacatgctcaagggaaagcagggtcgcttccgccagaacctgctgggcaag
cgcgtcgactactcgggtcgttcggtcatcatcgtcggaccccagctcaagctccaccag
tgcggtctgcccaagcagatggctctcgagctgttcaagcccttcgtgatcaagcgcctg
atcgacctgggccactcccagaacatcaaggccgccaagcgtgcggtcgagcgcttccgt
cccgaggtctgggacgtgctcgaagagatcatccgcgagcgccccgtgctgctgaaccgt
gcacccaccctgcaccgtctcggcatccaggcgttcgagccccagctcgtcgagggcaag
gccatccagctgcacccgctcgtgtgcgcggcgttcaacgccgacttcgacggtgaccag
atggctgtccacctgcccctgtcggtcgaggctcaggccgaggcccgcgtgctgatgctc
gcgtcgaacaacatcctgaagccgtcggacggccgtccggtcaccctgccctcgcaggac
atgatcatcggtctgcaccacctcaccaccctcaaggagggtgcgtcgggcgaaggccgt
gcgttcggttcggtgggcgaagcgatcctggccaaggacgagggcaccctcgacctgcag
gccaaggcgcgcatccgcatcccgggtctgacgttcctcgagggccaggcgcccgagggg
tacgagaagcacggtctcgtcgacgcctcgctcggtcaggcgatcttcaacgacacgctc
cccaagggctacccgttcgttcgcgagcaggccgacaagggcaagctgtcgcagatcgtc
aacaagctggccgaggagtaccccaaggtcgaggtcgcggcatcgctcgaccgcatcaag
gacgccggcttctactgggccacgcgctccggtgtgacggtggcgctgagcgacatcctc
acgccccccaacaagggcgagatcgtcgcgggctacgagaagcaggccgcgaaggtccag
gcgcagtacgagaagggtctcaccaccgacgccgagcgtcgtcaggagctcatcaagatc
tggaccgaggccaccgacgaggtccagaaggcgatgcgggacaacttccccgccgacaac
accatcaaccgcatggtctcgtcgggcgcccgtggtaactggctgcagatccgcaacatc
gcgggtatgcgcggcctggtgaacaaccccaagggtgagatcatcccgcgtccgatcatc
tcgtcgtaccgtgagggtctctcggtcgccgagtacttcatcgcgacgcacggtgctcgt
aagggcctggccgacaccgctctgcgtaccgccgactcgggttacctgacccgtcgtctg
gtggacgtctcgcaggacgtcatcatccgcgaggaagactgcggcacgtcgaagggcctc
gagctcccgatcgccgcggccgactcgagcggcgcgctggtcatggatgccaacgtcgag
aactccgtgttcgcccgcacgctggcgaccgaggtcgtcgacgcgcagggcacggttctg
gccgaggccggcgacgacgtgggcgacgtgctcatcgacaagctggtcgccggtggcatc
gagtccatcaaggtccgctcggtcctgacgtgcgactccgccgtcggtgtgtgcgcgaag
tgctacggccgttcgctcgcgaccggcaagatcgtcgacatcggcgaggccgtcggcatc
atcgcggcccagtcgatcggtgagcccggtacccagctgacgatgcgtaccttccacacc
ggtggttccgcgtcggccgacgacatcacgcagggtctgccccgcgtgcaggagctcttc
gaggcccgcacccccaagggtgcgtcgccgatcgccgaggccgacggccgcatcacgatc
gacgagaccgacaaggccaagaaggtcatcctcacgcccgacaacggagacgagccggtg
gtctaccccgtcctgaagcgcgcgacgctcctggtcgaagacggccagcacgtctcggtg
ggtgagcccctgcaggtcggaacgctcgaccccaaggaggtcatgcgcgtgcagggtgcc
cgcgaggtgcagaagtacctcgtgaacggcgtccagggcgtgtaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtccgtcagatgctccgcaaggtcaccgtc
gtcgaccacgccgacaccgacctgctcccgggtgagctcgtcgacttcaagcggtaccag
aacatcaaccgcgcggcggtcggcgagggcaagcgccccgcgtcgggtcgtcctgagctg
atgggtatcacgaaggcgtcgctcgcgacggagtcgtggctgtcggccgcgtcgttccag
gagaccacccgcgtcctgacgcaggcggccatggagggcaagagcgacccgctcgtcggt
ctcaaggaaaacgtcatcatcggaaagctcatccccgccggaaccggacttgcgaagtac
cgcaacgtcacggtcgaggcgacggaagaggccaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggcgcgtacagcgacgccgacctgagctacgtcgatttcgacagcttc
tcgtcggacgacttcacgcccggtacgtacaactga
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