Microbacterium sp. BH-3-3-3: BJP65_15535
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Entry
BJP65_15535 CDS
T04827
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03420
Nucleotide excision repair
mih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJP65_15535
03430 Mismatch repair
BJP65_15535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_15535
Enzymes [BR:
mih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP65_15535
DNA repair and recombination proteins [BR:
mih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP65_15535
MMR (mismatch excision repair)
Other MMR factors
BJP65_15535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOX47475
UniProt:
A0AAC9IDL1
LinkDB
All DBs
Position
3376528..3379815
Genome browser
AA seq
1095 aa
AA seq
DB search
MSATVSAAVIAAALGQFPPTSEQTSVIEAPLAPALVVAGAGSGKTETMAGRVVWLVANGL
VRRDEVLGLTFTRKAAGELAERIQRRLQRLAEFEARGLLPFLPALHEAGRLSVFADLAPL
DGARGDAARREALDALAAEVGAHADDAHDGDQLLHRPTVSTYNSFADGIVREHGVRIGRD
AESAVLSESAAWLLMRRVVFASDDPRLEERQESPRTLIDAALRIARDGVDNLVDLERLAA
FPDEFARIVERPSTSARVIVYKEVGDAAAKVSALSLLAALAADYDREKARVGVMDFADQV
AGALRIAREHPAVVAELRARYRVVLLDECQDTSVVQTDLLATLFGGTGVMAVGDPHQAIY
GWRGASAGNLGGFPAAFAPEGGCRHFALLTSWRNSAAVLRAANAVLAPLAARAAVEVGEL
APRPGAPAGVVDVVFENDLDAEADRVASWFVGVRAARAAEGRPTTGAILFRSKKHMVRFG
DALGRRGVPHRILGLGGLLTTPEVVDVVSALRVISDPEAGSALIRLLSGPRWAVGLADLR
ALAQLARRLATHDVGLQPLAPEVVDRLRSTPGADRASLVDALDFLTRQTDGHGWLAEITP
EGRARLRDAGAVFAALRRSVGAPIPELLRLIEVELRLDIELAANESRGPARIASAQLRAF
VDEIRGFLAADESGSVSSLLAWLDHAEQADEFAPRTEPPEDDVVQLLTIHGSKGLEWDAV
SVVRLVTDELPSLARDTKGWLGFGILPAEFRGDSAWLPVFGWRGAETQQDLKAAIDAFVA
DNRARQLDEDRRLAYVAFTRARDHLMLSGSSWSGTKRPRRPSVFLDEATEALGIDLEIGD
PGDDPYDGERRLLHWPLDPLGSRRTAVSAAAAAVNAARASGPVDADPDLALLLAERADRL
RPAHTPAPTRIPASRFKDFVADYGEAVEALRRPLPERPYRQTRLGTLFHAWVEQRSGLVG
AGIGLDDDALWDDDEAGASAADAAELERLRACFERSEWAPLMPLEVETEIDFVTTRLDGR
EHVVICKLDAVYRRGDRYEIVDWKTGRPPRTEAERTARMLQLELYREAYHAKHGIDLDRI
DVALFYVGDELVLRG
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccaccgtctcggcggcggtcatcgccgcggccctcgggcagttcccgccgacg
tcggaacagacgtcggtgatcgaagccccgctcgccccggcgctggtggtcgcgggcgcc
ggcagcggcaagaccgagacgatggccggacgcgtggtgtggctcgtcgcgaacggcctc
gtccgccgcgacgaggtcctcggactcaccttcacccgcaaggccgcgggcgagctcgcc
gagcgcatccagcggcggttgcagcgactggccgagttcgaggcgcgcggactgctgccc
ttcctcccggccctgcacgaggccggtcggctctcggtgttcgccgacctggcccccctc
gacggtgcccgcggcgatgccgctcgtcgtgaggcgctcgacgcgctggccgccgaggtc
ggtgcgcacgccgacgacgcccacgacggcgaccagctgctgcaccggccgaccgtctcg
acctacaacagcttcgccgacggaatcgtgcgcgagcacggcgtgcgcatcggccgcgac
gccgaatcggcggtgctctcggagtcggcggcctggttgctcatgcggcgcgtggtgttc
gcctccgatgatccgcgactcgaggagcgacaggaatccccgcgcacgttgatcgacgcc
gcactgcgcatcgcgcgcgacggcgtcgacaacctggtcgacctcgagcgtctcgccgcg
ttccccgacgagttcgcgcgcatcgtcgagcgcccctcgacgtcggcccgcgtgatcgtc
tacaaagaggtgggcgacgccgcggcgaaagtgtcggcgctctcactgctcgccgccctc
gccgcggactacgaccgcgagaaggcccgcgtcggggtgatggatttcgccgatcaggtg
gcgggcgcgctgcgcatcgcccgggagcacccggcggtggtcgccgaactccgcgcgcgg
tatcgggtcgtgctcctcgacgagtgccaggacacctcggtcgtgcagaccgacctgctc
gcgacgctgttcggcgggaccggggtcatggccgtcggcgatccccaccaggccatctac
gggtggcggggcgccagtgcgggcaacctcggcggattccccgccgctttcgccccggag
gggggatgccggcacttcgcgctgctgacgagttggcgcaacagcgcggcggtgctgcgg
gcggccaacgcggtcctcgcccccctcgccgcgcgcgcggctgtcgaggtgggcgaactc
gccccgcgccccggcgcgccggcgggcgtcgtcgacgtggtcttcgagaacgacctcgac
gccgaggccgatcgcgtcgcgtcgtggttcgtcggggtccgcgccgcccgcgcggccgag
ggacgccccacgacgggagcgatcctcttccgcagcaagaagcacatggtgcgcttcgga
gacgcactcggccgacgcggggtccctcatcgcatcctgggcctcggcgggctcctcacc
acccccgaggtggtcgatgtcgtctcggccctgcgggtcatcagcgaccccgaggccgga
tcggcgctgatccgattgctgtcgggcccgcggtgggccgtgggcctggccgatcttcgc
gccctggcgcagctggcacgacgcctcgccacgcacgacgtcggcctgcagcccctcgcc
cccgaggtcgtcgaccgactgcgctccacaccgggggccgaccgggcctcgctcgtcgac
gcgctcgacttcctcacgcgtcagaccgacggccacggctggctggccgagatcaccccc
gaggggcgcgcgcggctgcgcgacgccggtgccgtgttcgcggcgctccggcgcagcgtt
ggcgcaccgatcccggagctcctgcgattgatcgaggtcgagttgcgtctcgacatcgag
ctcgccgcgaacgaatcgcgcggccccgcccgcatcgcctcggcgcagttgcgcgcgttc
gtcgacgagatccgcggtttcctcgccgccgacgagtcggggtcggtgtcgagcctgctc
gcgtggctcgatcacgccgagcaggccgacgagttcgccccgcgcaccgagccgcccgaa
gacgacgtggtgcaactgctcacgatccacggctcgaaagggctcgagtgggatgccgtc
tcggtggtgcgcctggtcaccgacgagctcccctcgctggcacgcgacacgaagggatgg
ctggggttcggcatccttcccgcggagttccgcggtgattccgcctggcttccggtgttc
gggtggcggggtgccgagactcagcaggacctcaaggccgccatcgacgccttcgtcgcc
gacaaccgggcgcggcaactcgacgaggatcgccgcctcgcctacgtggccttcacccgt
gcccgcgaccatctgatgctctcgggatcgagctggtcggggacgaagcgcccgcgccgc
ccgagcgtgttcctcgacgaggcgaccgaagcgctcggcatcgacctcgagatcggtgat
ccgggcgacgatccgtacgacggggaacgtcgtctgctgcactggccgctcgacccgctc
gggtcgcgtcgtacggccgtctcggccgccgcggccgcggtgaacgccgcgcgtgcgtcg
ggaccggtcgatgccgatcccgacctcgcgttgcttctcgccgagcgcgccgaccggctg
cgtccggcccatacgcccgcgcccacgcgcattcccgcttctcgcttcaaggacttcgtc
gccgactacggcgaggcggtcgaggcgctccgccgtcccctccccgagcgcccttaccgc
cagacgcgcctgggcaccctgttccacgcctgggtcgaacagcgatcggggctcgtgggc
gcggggatcggcctcgacgacgacgcgctgtgggacgacgacgaggcgggtgcatcggcc
gccgacgcggccgaactcgagcgcctgcgcgcgtgcttcgagcggtcggaatgggcgccg
ctgatgccgctcgaggtcgagaccgagatcgacttcgtcacgacgcggctcgacggccgc
gaacacgtcgtcatctgcaaactcgacgccgtctaccggcgcggggaccgctacgagatc
gtcgactggaagaccggtcgtccgccgcgcaccgaggccgagcgcaccgcgcgcatgttg
cagctcgagctctaccgtgaggcgtatcacgccaagcacggcatcgacctcgaccgcatc
gacgtcgcgctgttctacgtcggcgacgagctcgtgctgcgcggctga
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