Microbacterium sp. BH-3-3-3: BJP65_15550
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Entry
BJP65_15550 CDS
T04827
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03420
Nucleotide excision repair
mih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJP65_15550
03430 Mismatch repair
BJP65_15550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_15550
Enzymes [BR:
mih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP65_15550
DNA repair and recombination proteins [BR:
mih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP65_15550
MMR (mismatch excision repair)
Other MMR factors
BJP65_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOX47020
UniProt:
A0AAC9N9S8
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All DBs
Position
3382502..3384253
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AA seq
583 aa
AA seq
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MTGPLDGLDEHQLEAARALRGPVCVLAGAGTGKTRVITRRIAHGVDTGAYSPQRVMAVTF
TSKAAGEMRGRLRALGVTGVSARTFHAAALAQVNFFWPTLAGDQAPSIIDNKVRMLAHAA
DGVGLAPDTATLRDVAASIEWRKVTLRSVEQYAAERPEGVGRLGVDQVVALQRAYEKLKD
ERRQMDFEDVLLTCAGMIEAEPRVAAAVREQYRHFTVDEYQDVSPLQNRLLELWLGDRRD
LCVVGDASQTVYSFTGADARYLLDFERTHDDARVVRLERNYRSSAPVLAVANDLMRGRAG
ALELVAARDDEAVVPTVRGFDDDEAEATAVARSIADSMKRGVDPHDIAVLYRSHAQSAAL
LSALSAVGVAASVLGGRKFFDLPEVRQALMALRAASVAPLETGFHATVRDVLRGMGLTDD
PPEAGGALREAWEARAALLRLAEEAPDDMDLRAFTDDLQARARDQHEPTTRTVTLATLHA
AKGLEWDHVYLVGVSEGLLPISYAKTFEAVDEERRLAYVGVTRAARTLSVSWARGRGRME
RSPSRFLREIGSGSLHSVDAAARPAGTNRRAAAPTASSRRSAS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggccccctcgacggactcgacgagcaccagctggaggcggcgcgcgcgctgcgc
ggaccggtgtgcgtcctcgcgggcgcggggacaggcaagacccgcgtcatcacccggcgt
atcgcgcacggcgtcgacacgggcgcctactcgcctcagcgggtcatggcggtcaccttc
acctcgaaggcggcgggcgagatgcgggggcggctgcgggcgctcggggtgacgggcgtc
tcggcgcggacgttccacgccgcggcgttggctcaggtgaacttcttctggcctaccctc
gcgggcgaccaggcgccctcgatcatcgacaacaaggtgcgcatgctcgcgcacgccgcc
gacggggtggggctggcgcccgacaccgcgaccctgcgggatgtggccgcctcgatcgag
tggcgcaaagtgaccctgcgctcggtcgagcagtacgccgcggagcgccccgagggcgtc
ggtcgactcggggtcgatcaggtggtcgcgttgcagcgggcgtacgagaagctcaaggac
gagcggcgtcagatggacttcgaagacgtgctgctcacctgcgcgggcatgatcgaggcg
gagccgcgggtggccgccgccgtccgcgagcagtaccggcacttcaccgtcgacgagtat
caggacgtctcgccccttcagaaccgcctgctcgagctgtggctgggcgaccgccgcgac
ctgtgcgtcgtcggcgatgccagtcagacggtgtattcgttcaccggggccgatgcccgc
tacctgctcgacttcgagcggacccacgacgacgcgcgcgtggtgcgcctggaacgcaac
tatcgctccagtgcgccggtgctggccgtcgcgaacgacctcatgcgcggccgcgcgggc
gctctcgaactggtcgccgcccgcgacgacgaggcggtcgtccccaccgtccgcgggttc
gacgatgacgaagccgaggccacggccgtggcccgatccatcgccgattcgatgaagcgc
ggcgtcgatccgcacgacatcgccgtgctgtaccgctcgcacgcgcagtcggcggcgctg
ctgtcggcgctgtcggcggtgggagtggcggcatccgtcctgggcgggcgcaagttcttc
gacctccccgaggtgcggcaggcgctcatggccctgcgcgcggcatcggtggcgccgctg
gagacgggcttccacgccacggtccgtgacgttctgcgcggcatggggctcaccgatgat
ccccccgaggccgggggcgccctccgcgaagcgtgggaggcacgggcggcgctgctgcgc
ctggccgaagaggccccggacgacatggacctccgcgcgttcaccgacgacctgcaggcg
cgcgcgcgcgaccagcacgagccgacgacgcgcacggtgacgctggcgacgctgcacgcg
gccaagggtctggaatgggatcacgtctacctcgtgggggtgagcgagggcctgctgccg
atctcgtacgcgaagaccttcgaggccgtcgacgaagaacgtcgactcgcctacgtcggg
gtcacccgtgccgcgcgcacgctctcggtcagctgggcacggggacgcggccggatggaa
cgctcgccgtcgaggttccttcgagagatcggcagtggcagtctgcactcggtcgatgca
gctgccagacccgccggaacgaatcgacgcgcagccgcaccgaccgcgtcgtctcggcga
tcggcgagctga
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