Microbulbifer sp. A4B17: BTJ40_02815
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Entry
BTJ40_02815 CDS
T05421
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mii
Microbulbifer sp. A4B17
Pathway
mii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTJ40_02815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mii03021
]
BTJ40_02815
03400 DNA repair and recombination proteins [BR:
mii03400
]
BTJ40_02815
Enzymes [BR:
mii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTJ40_02815
Transcription machinery [BR:
mii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTJ40_02815
DNA repair and recombination proteins [BR:
mii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTJ40_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF2490
Motif
Other DBs
NCBI-ProteinID:
AWF79832
UniProt:
A0A2S1JN73
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All DBs
Position
620207..621211
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AA seq
334 aa
AA seq
DB search
MQTAVNEFLTPRRIDVTEYNPNHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVEHEYSAIEGVQEDVIEILLNLKEIAVVMHGKDQAVLSLSKKGPGAVTAGDIQVDHD
IEIVNPEHVIANITGDVELNLRLTVARGRGYQPADARREEEEESRAIGRLQLDASYSPVR
RVSYSVESARVEQRTDLDKLVLDLETNGTLDPEEAIRRAATILQQQLAVFVDLEGEKDAQ
PKAEEPEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLKGDSKLSPL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgctgtcaacgagtttttgacaccgcgtcgtattgacgtcaccgagtacaat
ccgaatcacgccaaagtgattctggagcccctggagcgtggctttggccacactcttggc
aatgcgctgcgtcgcatcctgctgtcctccatgccgggctgcgccgtcaccgaggtggaa
atcgaaggtgtcgagcacgagtacagcgcgatcgaaggtgtgcaggaagatgtaattgaa
atcctgctcaacctgaaagaaatcgccgttgttatgcacggtaaggatcaggcggtattg
agcctgagcaaaaagggcccaggtgcagtgactgctggagatattcaggtagatcacgac
atcgagatcgttaaccctgagcacgtgatcgccaatattactggtgatgtcgaactcaac
ctgcgtctcactgtagcgcgcggccgcggctatcagcccgccgatgctcgccgtgaggag
gaagaggaaagccgtgcaattggccgtctgcagctggatgcttcttacagcccggttcgt
cgcgtttcctacagcgtggaaagcgcgcgcgtagagcagcgcactgacctggacaagctg
gttctggatctggagaccaatggtactctggacccggaagaggcgattcgtcgcgccgcc
acaattctgcagcaacagctcgcagtatttgtggacctggaaggcgaaaaggatgcacaa
ccgaaggctgaagagcccgaagttgatccggtactgctgcgcccggtagatgacctggag
ctgactgtacgttcggctaactgtctgaaagcagaaaacatttactacatcggtgatctg
attcagcgcactgaagtagaactgcttaagaccccgaaccttggtaagaagtctctgact
gagatcaaggacgtactggcttcccgtggtttgtccctgggtatgcgcctggaaaactgg
ccgccggccagcctgaagggcgacagcaagttaagccccctgtaa
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