Microbulbifer sp. A4B17: BTJ40_07720
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Entry
BTJ40_07720 CDS
T05421
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mii
Microbulbifer sp. A4B17
Pathway
mii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTJ40_07720 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mii03019
]
BTJ40_07720 (recQ)
03400 DNA repair and recombination proteins [BR:
mii03400
]
BTJ40_07720 (recQ)
Enzymes [BR:
mii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTJ40_07720 (recQ)
Messenger RNA biogenesis [BR:
mii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTJ40_07720 (recQ)
DNA repair and recombination proteins [BR:
mii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTJ40_07720 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
DNA_pol_A_exoN
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
AWF80713
UniProt:
A0A2S1JQS2
LinkDB
All DBs
Position
complement(1723098..1724903)
Genome browser
AA seq
601 aa
AA seq
DB search
MNSPQHILEHVFGYTDFRDPQKAVIDTLVAGNDALVLMPTGGGKSLCYQIPALARPGCGV
VISPLIALMQDQVEALQEAGIRAAYLNSSVAYDEIQAIESQLLHGELDLLYLAPERLLQP
RTLSLLQRVELSLFAIDEAHCVSQWGHDFRADYLQLNCLHEQFPRVPRIALTATADKRTR
AEIARRLDLEEARHFVSSFDRPNIQYRIEPKDNQRRQLLQFLQNGHQGNAGVIYCLSRAK
VENTAEWLSQQGFTALPYHAGLPTETRAEHQRRFLREEGVIVVATIAFGMGIDKPDVRFV
VHLDLPKSIEAYYQETGRAGRDGGASIALLLYGLEDVVKIGQMVESSEGSEEHKRQERSR
LNAMLGLCEITSCRRQALLDYFAEPLDKPCGNCDTCLEPPATWDASEAAVKLLSCIYRTG
QRFGASHVIDVLRGSENEKVRKFEHDQLSTHGIGKDLSAAEWRAVVRQLIVRGYLEVEGE
FQGLRLTEICRPLLRREETLSLRKLPPKAARSQSRDNRSLDDLSPENQVLWEALRNCRKQ
LAEERGVPPYVVFHDATLRGMVQAHPQTRSELLAVSGVGDSKLERFGDAFLAVLRDFPKH
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaattccccacaacatattctcgaacacgtttttggctataccgatttccgcgatcct
caaaaagcagttatcgacactctggtagccggcaatgatgccctggtattaatgcccacc
ggcggtggtaaatccctgtgctaccagattcccgccctggcgcgccccgggtgtggagtt
gtaatctcccccctgattgccctgatgcaggaccaggtagaagctcttcaggaagccggc
atccgcgccgcttacttgaattcatcagtggcctacgacgaaatccaggcaatcgaaagc
cagctattacacggtgagctggatctcctctatctagcccccgagcggttgctacagcca
cgaaccctgtcattactgcaacgggtggaactgtcgctgtttgccattgatgaagcccac
tgtgtttcccaatgggggcacgactttcgcgccgactatctgcaactcaactgcctgcac
gagcaattcccccgggtaccccgtattgccctgacagcgacagcagacaagcgcacccgt
gcagaaattgctcgccgcctggacttggaagaggcccgccactttgtcagcagcttcgac
cgccccaatatccagtaccgcattgagcccaaggacaaccagcgccgccaactgctgcaa
ttcttacaaaacggacatcagggcaacgccggggttatttactgcctgtcccgagccaaa
gtggagaacactgcggagtggttgagccagcagggcttcactgccctgccctatcacgcc
ggactacccaccgagacccgcgccgagcaccagcgccgcttcctgcgtgaagagggtgtc
attgttgttgccaccattgcatttggcatggggatcgataaaccagatgtgcgtttcgtt
gttcacctggatctgcccaagagtatcgaagcctactaccaggaaactggccgtgcaggc
cgcgatggcggtgcctcaattgctcttttgctctatggtctcgaggatgtggtaaagatc
ggccagatggtggagtcctcagagggcagcgaagagcacaagcgccaggagcgcagccgc
ctgaatgccatgctcgggctgtgtgagatcaccagctgccgccgccaggccctgctggac
tactttgcggaacccctggacaaaccctgcggcaactgtgacacctgcctggagccgcct
gccacctgggatgccagtgaggcagcggtaaaactactctcctgtatctatcgcaccgga
cagcgctttggcgctagccacgtgatcgatgtactgcgcggctccgagaacgagaaagtc
cgcaagttcgagcacgaccagctttccactcatggcatcggcaaagacctgagcgcagcc
gaatggcgggcagtcgtgcggcagctgattgtgcgcggctacctggaggtcgagggagaa
ttccaggggctgaggctcactgaaatttgtcgcccgctgctgcgacgggaggaaactctc
agcctgcgcaagcttcccccaaaagcggcgcgctcgcagagccgtgacaatcgcagcctg
gatgatctcagcccagaaaaccaggtgctttgggaagccctgcgcaactgtcgcaaacag
ttggcagaagagcggggtgtgccgccttatgtcgtcttccacgatgcgaccctgcgcggt
atggtacaagcccacccacaaacacgcagcgagctattagcggtctccggcgttggagac
agtaagctcgaacgcttcggcgatgcatttttggcggttctcagggattttcccaaacac
gaataa
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