Microbulbifer sp. A4B17: BTJ40_15440
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Entry
BTJ40_15440 CDS
T05421
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mii
Microbulbifer sp. A4B17
Pathway
mii03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mii00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BTJ40_15440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mii03019
]
BTJ40_15440
03009 Ribosome biogenesis [BR:
mii03009
]
BTJ40_15440
03036 Chromosome and associated proteins [BR:
mii03036
]
BTJ40_15440
Enzymes [BR:
mii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BTJ40_15440
Messenger RNA biogenesis [BR:
mii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BTJ40_15440
Ribosome biogenesis [BR:
mii03009
]
Eukaryotic type
90S particles
RNase
BTJ40_15440
Prokaryotic type
rRNA processing factors
BTJ40_15440
Chromosome and associated proteins [BR:
mii03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BTJ40_15440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
UreE_N
Motif
Other DBs
NCBI-ProteinID:
AWF82111
LinkDB
All DBs
Position
complement(3503655..3504335)
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AA seq
226 aa
AA seq
DB search
MTDLLLERLCKRLGHDFDQAELLELALTHRSHGSRNNERLEFLGDSILGFTIGAALYERF
PNGREGQLSRLRAQLVSGETLAKLARELEIGDCLRLGEGEMKSGGFRRASILADAVEALI
GAIYLDAGLEAARLRVLEWFAPRLQGLSLETVKDPKTRLQEWLQARKKPLPEYKVVGVSG
AEHAQHFVVECRVSGLSQPVKGEASSRRNAEKTAAVEAYKLLTGQD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatcttttattggaacgcctttgcaagcgcctcggccatgattttgaccaggcc
gagctacttgaattggctcttactcaccgttcccacggcagtcgtaataatgaacgcctt
gaatttctcggcgactctattctcgggtttactataggcgcggctctttacgagcggttc
cccaatggacgggaggggcagttgagtcgattgagggctcaattggtcagcggtgaaaca
ctggcaaagctggctcgggagctggagattggcgattgcctgcgcctcggtgaaggcgaa
atgaaaagtggcggctttcgtcgggcttctattctcgccgatgccgtagaggccctgatt
ggcgccatctatcttgatgctggcctggaggcggcgcgactcagggtgctcgagtggttt
gcaccgcgtttgcagggactatcattggagaccgtgaaggaccccaaaacccgcttgcag
gagtggcttcaggcacgtaaaaagccgctgccggaatacaaggtggtgggtgtttctggc
gctgagcacgcacagcattttgtggtggaatgtcgtgtcagtggcctttcacagcctgta
aaaggtgaggccagcagtcgtcgtaatgctgaaaagactgcggcggttgaagcttacaag
ctcctcaccgggcaggactaa
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