Microbulbifer sp. A4B17: BTJ40_21460
Help
Entry
BTJ40_21460 CDS
T05421
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mii
Microbulbifer sp. A4B17
Pathway
mii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BTJ40_21460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mii03400
]
BTJ40_21460
Enzymes [BR:
mii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTJ40_21460
DNA repair and recombination proteins [BR:
mii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BTJ40_21460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
WHD_PriA
IBR_1
AAA_19
SLFN-g3_helicase
HypA
TrwB_AAD_bind
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AWF83176
LinkDB
All DBs
Position
complement(4898527..4900740)
Genome browser
AA seq
737 aa
AA seq
DB search
MQESVQQRVILRLAVPVPLRRLFDYLPPEGLSPESLRPGQRLWVPFAGRKLVAVLLDIVQ
ESPHSSLKPALELVDSEVLFGDGSRKLLSWIADYYQAPLGEVYAAALPVALRKGKPSDHW
AEQWLQLTTEGKGLPETALARAPKQQALFQLLLSDGKQSRTHLKTLGHNTPVIRALQDRG
LVEWIPGPTVPAPLPAAESTPAPELNSEQQQVLDSIDCSGFSASLLEGTTGSGKTEVYLR
LMQRVLDSGRQALLLVPEIGLTPQTLRRIAARFPKHSIAALHSGLADGERAQSWLAAAGG
QADIVIGTRSAIMTPLPRLGVVIVDEEHDASFKQQDGVRYSARDLAVVLGRNNNVPVVLG
SATPSLETLHNALNGRYQHLRMRYRAGDAKPPQIHVVPTLREPLEEGFSPQVLRHIGDTL
ARGEQALVFINRRGFAPALTCDDCGWLADCPHCSSKLTMHRRQRQLRCHHCDYRRPLVDS
CPQCHSRSISALGAGTERSEELLARRFADYPVIRVDRDTTASKQALDKLLAPAREGEPCL
LLGTQMLAKGHHLPKVTLVVIQDADGGLFSADFRAPERTGQLLEQVAGRAGRGSLSGRVL
VQSRFPEHPLLQLLLEKGYGAFARQLLRDRTVAQLPPASAMALVRAECEEPGWAEEFLQN
ARLFMQSLAPPSPQIQYLGPVPALLERKSGRFRFYIQVTAQNRAHLQPLLARVCAWAEGN
KNRRLRWAVDMDAQELS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggagtcagtccaacaaagagtcattttaaggctggcagtgcccgtgcccctgagg
cgcttgtttgactatttgccgccagagggactgtcgccggagtcactgcggcccggccag
cgcctctgggtgccctttgccgggcgcaagttagtggcagtactgttggatatagtgcag
gagtcgccgcacagcagtttgaagccagcgctggaactggtggattcggaggttctgttt
ggtgatggcagccgcaagctgctgtcctggattgccgactattaccaggcgcccctcggc
gaggtctacgccgctgccctgcccgtggcactgcgcaaaggcaagccgtctgatcattgg
gcggagcagtggcttcagctcacgacagagggaaagggcttaccggaaactgcactggcg
cgcgcccccaagcagcaggctctattccagttgctgttgagtgatggcaagcagagccga
acccaccttaagaccctcggccacaatacccccgtgatccgcgccctacaggatcgcggc
ctggtggagtggattccaggccctaccgtacctgcgccgctacccgcagcagagagtaca
ccggctccggagctgaacagcgaacagcaacaggtgctcgacagtatcgattgcagcggc
ttttctgcctcactactggagggcaccaccggcagtggcaagaccgaagtttatttgcgc
ctgatgcagcgggttctggatagcggtcgccaggcattgttactggtgccggagattgga
cttacgccgcaaacgctgaggcgtattgccgcacgatttcccaagcacagtattgcagcg
ctgcactctggcttggccgacggtgagcgcgctcaatcctggttggcggccgcgggcggg
caggcagatattgtgatcggcacccgctcagccattatgactcccctgcccaggctcggc
gttgtgattgtcgatgaagagcacgatgcctcttttaaacagcaggacggtgtgcgctat
tcggcccgggacttggctgtggttttgggccggaacaataatgtaccggtggttttgggt
tcggccacgccctctctggaaaccttgcacaacgctctgaatgggcgctatcaacacctg
cgtatgcgctatcgcgccggtgatgccaagccgccgcaaattcacgtagtaccgacactg
cgggagcctttggaagagggattttctccccaggtgctgcgccatatcggcgatacactt
gcgcgaggtgagcaggccctggtgtttatcaaccggcgcggctttgcccccgcgctgact
tgtgatgattgcggctggctggcggattgcccgcactgctcgagcaagctgactatgcac
cggcggcaacgccagttgcgctgccatcactgcgattaccgccgcccgctagttgatagc
tgtccacaatgtcacagccgttcgatctcggccctgggtgctggcacggaacgcagcgag
gaactgttggcccgtcgctttgccgactacccggtgatacgtgtggaccgggataccacg
gcgagcaaacaggcgctggataaattgttagcaccggcgcgggagggggagccctgcctg
ttgttgggaacccagatgctggccaaggggcaccatttgcccaaggtcactttggtagta
atccaggatgccgatggcggcttgttcagtgcagactttcgcgcgccagagcgtaccggc
cagttattggaacaggtggcgggtcgtgcggggcgcggcagtctcagtgggcgggtattg
gttcagagccgctttcccgagcacccgcttttacaattgctgctggaaaaaggttatggc
gcttttgcgcgccagttgctgagggatcgcacggttgcacagttgccccctgcgagtgct
atggcgctggtgagagcggagtgtgaagagcccggttgggccgaagagtttttacaaaat
gcgcgactctttatgcagtccctggcacccccatcgccacagatccaatatctggggccg
gtgccggcactactggaacgtaaatccgggcgcttccggttttatattcaggtcaccgca
caaaaccgagcccacctacagccgctgctggcgcgagtgtgtgcctgggcggagggcaat
aaaaatcgccgcctgcgctgggctgtggatatggatgcgcaggaattatcgtga
DBGET
integrated database retrieval system
