Microbulbifer sp. A4B17: BTJ40_21600
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Entry
BTJ40_21600 CDS
T05421
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mii
Microbulbifer sp. A4B17
Pathway
mii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BTJ40_21600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mii03400
]
BTJ40_21600
Enzymes [BR:
mii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BTJ40_21600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BTJ40_21600
DNA repair and recombination proteins [BR:
mii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BTJ40_21600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AWF83202
UniProt:
A0A2S1JXW1
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All DBs
Position
complement(4928476..4929291)
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AA seq
271 aa
AA seq
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MPELPEVETTLRGLQPHLEGHKIRSAKVRQHRLRWPVEADFERRIRNARILKLERRAKYL
LVHTDKGCAIWHLGMSGSLRMVEAALAPEKHDHIDWRMDSGLTLRYRDPRRFGALLWTAA
DPLAHDLLTHLGPEPLSEELSGDYLFEASRKRKQSVKTLIMDGRIVVGVGNIYASESLFL
AGIRPDRQAGSISRTRYQRLAESIKQVLSRAIAQGGTTLRDFIGGDGKPGYFAQQLNVYG
RAGEPCPSCGRAVRDIVLGQRSTFFCSSCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctcccggaagtagaaaccactctcagaggtctgcaacctcaccttgagggg
cacaaaattcgctccgcaaaggtgcgtcagcaccggttgcgttggcccgtggaagcagat
tttgagcgtcgtatccgcaatgcccggatattgaagctggagcgccgtgccaagtacctg
ctggtgcatacagataagggctgcgctatctggcatctgggaatgtctggcagcctgcgt
atggttgaggccgcactggcaccggaaaagcatgatcatatcgactggcgcatggatagc
ggcctcacactgcgctatcgcgacccgcgtcgttttggtgccctgctgtggacggcggcg
gatcctttagcccacgatttactcactcacctgggcccggagcctctgtcagaagagctt
agcggtgactatttgttcgaagcttcgcgcaagcgaaagcagtcggttaaaacacttatt
atggatggccgcatcgttgtgggggtgggtaatatctacgccagcgaatccttgttcctg
gcgggcattcgccccgatcggcaggcgggctctatttctcgtacccgataccagcgcttg
gcagagtccataaagcaggttctgagccgggcgatcgcccagggcggtacgaccttgaga
gactttattggtggcgatggaaaaccgggctatttcgcccagcagctcaatgtctatggg
cgagcaggtgaaccctgcccctcttgtggtcgagcggttcgggacatagtgctgggccag
cgaagtacttttttctgctccagctgccaacgttaa
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