Mycolicibacterium insubricum: MINS_33540
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Entry
MINS_33540 CDS
T06933
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mij
Mycolicibacterium insubricum
Pathway
mij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MINS_33540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mij03019
]
MINS_33540
03400 DNA repair and recombination proteins [BR:
mij03400
]
MINS_33540
Enzymes [BR:
mij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MINS_33540
Messenger RNA biogenesis [BR:
mij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MINS_33540
DNA repair and recombination proteins [BR:
mij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MINS_33540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
TrmB
Motif
Other DBs
NCBI-ProteinID:
BBZ67925
LinkDB
All DBs
Position
complement(3531436..3533547)
Genome browser
AA seq
703 aa
AA seq
DB search
MTEPLSGTREQRAREVIEALAGPGATLREDQQRAVAALLEPAARVLVVQATGWGKSAVYW
VATAIRRAEGAGPALIVSPLLSLMRDQVAAAERAGLRAATLNSSNFEEWNTIEARLHDGE
IDVLLVSPERLANPSFGRRVLAALEGTMGLLVIDEAHAVSDWGHDFRPDYRRVADVLTRL
NPATPVLATTATANARVTADVAGQLGDATLVLRGPLARRSLQLNVLDSMSPLNRYAWVAR
HLDELPGSGIVYVLTVVDAQRLVDAVKSVHPNAKVAAYTGQLDADTRAGCEDALRDNRIK
ALIATSALGMGFDKPDLGFVVHIGSPPSPVSYYQQVGRAGRAIDNATVVLLPSESDTGVW
DYFATATIPDPDQMQGLLAALADESQTGDQPASAVALEAATGIRRTRVDLMLKQLAVDGA
VERVDGGWRVTGTPWHYDAEHYAGIVATRRREADIMAAYTHGKQCLMQLLTASLDDPREQ
PCGRCSVCLGRVPDGLAEPADDDLTRTVARTLRANATVLEPRKMWPGGAFGARGKIPAQL
AAEPGRVLVHADAPEWTGVIPAATAGNPGAIAELAEAAVGVLGRWRSEWIARPEVAVSLQ
LTASQTPVGPVTDRIAEVGRLPRTVIPVAAGTPPGRDAAGAEQAAYWRTAIGVDGALLDA
VSGRTVLLVADVTSTGWPVTVAAAHLRDAGAKAVLPLVIHRPA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaccgttgagcggtacccgcgaacagcgggcccgcgaggtcatcgaagccctc
gccggccccggcgccaccctgcgcgaggaccagcagagagccgtcgccgcactattggaa
ccagccgcccgggtactcgtcgtgcaggccaccgggtggggcaagtcggcggtgtactgg
gtggcaaccgcgatccgccgggccgagggcgccggcccggcactgatcgtctcgccgctg
ctgtcgctgatgcgtgaccaggtcgccgccgcggaacgggcgggcctgcgcgccgccacc
ctgaactcgtcgaacttcgaggaatggaacaccatcgaagcccgtctgcacgacggggag
atcgacgtgctgctggtgagcccggagcgcctggccaacccgtcgttcggacgacgggtg
ctcgccgcgctggaaggcaccatggggctgctggtgatcgacgaggcgcacgcggtctcg
gactggggccacgacttccggcccgactaccgccgcgtcgccgacgtcctgacccggctc
aatccggcgaccccggtgctggccaccaccgcaactgccaacgcccgggtcaccgcggac
gtcgccggtcagctcggcgacgcgaccctggtgctgcgcggcccactggcgcggcggtca
ctgcaactcaacgtgctcgattcgatgtccccgctgaaccgctacgcctgggtcgcccgc
cacctcgacgaactgccgggatcgggcatcgtctatgtcctgaccgtcgtcgacgcgcaa
cgcctggtcgatgcggtcaaatcggtgcacccgaacgccaaggtcgccgcctacaccggt
cagctcgacgccgatacccgcgccgggtgcgaagatgcgttgcgcgacaaccggatcaag
gcgctgatcgccacctcggcgctcggtatgggtttcgacaaacccgacttgggcttcgtc
gtgcacatcggttcgccgccttcaccggtcagctactaccagcaggtcggccgggccggc
cgcgccatcgacaacgcgacggtggtgctgctgccgtcggagtccgacaccggcgtctgg
gactacttcgccaccgccaccatccccgaccccgaccaaatgcagggcctgctggccgcg
ctggccgacgagtcgcagaccggcgaccagccggcgtcggcggtcgcgctggaggccgcc
accggaatccggcgcacccgggtcgacctgatgctcaaacagctcgccgtcgacggtgcg
gtcgagcgggtcgacggcggctggcgggtcaccgggacgccgtggcactacgacgccgag
cactacgccggcatcgtcgcgacgcggcgccgcgaagccgacatcatggccgcctacacg
cacgggaagcagtgcctgatgcagctgctcaccgcctcgctggacgacccccgggagcag
ccgtgcggacggtgctcggtctgcctgggccgggttcccgacgggctggccgaacccgcc
gacgacgacctcacccgcaccgtcgcccgcaccttgcgggccaacgccaccgtgttggaa
ccgcgcaagatgtggccgggcggtgcgttcggcgcccgcggcaagatccccgcgcaactg
gcagccgaaccgggccgggtactcgtgcacgccgacgccccggaatggaccggggtgatc
ccggccgctaccgccgggaatcccggtgccatcgcagagctcgccgaggccgccgtcggc
gtgctcggtcggtggcgctcggagtggatcgcccgccccgaagtcgcggtgtccctgcag
ctcaccgcatcgcagacgccggtgggcccggtcaccgaccggatcgccgaggtcggccgg
ctgccgcggacggtcataccggtggccgccgggacgccaccggggcgcgacgccgccggc
gccgagcaggccgcgtactggcgtacggcgatcggcgtcgacggcgccctgctggacgcg
gtgtccgggcggacggtgctgctggtcgccgacgtgacctcgaccgggtggccggtcacc
gtcgccgctgcgcacctgcgcgacgccggagccaaggcggtgttgcccctggtgatccac
cggcccgcgtga
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