Mycolicibacterium insubricum: MINS_36640
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Entry
MINS_36640 CDS
T06933
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
mij
Mycolicibacterium insubricum
Pathway
mij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MINS_36640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mij03021
]
MINS_36640
03019 Messenger RNA biogenesis [BR:
mij03019
]
MINS_36640
Transcription machinery [BR:
mij03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MINS_36640
Messenger RNA biogenesis [BR:
mij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MINS_36640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Fungal_virus_P2_C
VWA_2
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBZ68235
LinkDB
All DBs
Position
complement(3863124..3865022)
Genome browser
AA seq
632 aa
AA seq
DB search
MTDTDLMTATTGNGAPGGKLDNALTSMLLPELKALAGQVGVKGTSGMRKGDLIAAIRAHQ
AGGSGSPAKGAAPAKAAQAAPAAQAPATDAPAAQATDRPAAAEAPAAPTQTQVAEPASEG
GEPARRERRGASRDAGATAGEQGQQAGAGGAEGRPERTGQDGNRGNRGNGGNQGGNQANQ
GGGNQNANQGGGNQNANQGGNQNANNGSADDDDGRGGRRGRRFRDRRRRERGGPAGEGGD
TDLREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGAVR
VPREGEGGGGDKNQRQKFNPLVRLDTVNGGPVEAAKNRPEFGKLTPLYPNQRLRLETTPE
KLSTRIIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITRNNPECHLMVVLVDERPEE
VTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYN
NASPASGRILSGGVDSTALYPPKRFLGAARNIEDGGSLTIIATAMVETGSTGDTVIFEEF
KGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQA
IDLLMSQLRKTKNNYEFLVQVSKTAPGGVDAD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatgacggccacaaccggcaacggtgcgcccggagggaagctc
gacaacgccctgacctcgatgttgctgcccgaattgaaggcgctggccggccaggtcggc
gtcaagggcacctcggggatgcgcaagggcgacctcatcgccgctattcgcgcgcaccag
gccggtggcagcgggtcgcccgccaagggcgccgcgccggccaaggccgcacaagcggca
cccgccgcgcaggctcccgccaccgacgcccccgccgcgcaggccaccgaccgtccggcc
gccgccgaggcgccggccgcacccacccagacgcaggttgccgagcccgcgagcgaaggc
ggcgagcccgcgcgtcgcgagcgtcgcggcgcctcccgcgacgccggcgccaccgccggt
gagcaggggcagcaggccggcgccggtggcgccgaagggcgccccgagcgcaccggccag
gacggcaaccgcggcaaccgcggcaacggcggtaaccagggcggcaaccaggccaaccag
ggcggtgggaaccagaacgccaaccagggcggcggcaaccagaacgccaatcagggtggg
aaccagaacgccaacaacggcagcgccgatgacgacgacggccgcggcggccgtcggggc
cggcggttccgcgatcgtcgtcgccgggaacgcggcggtccggccggtgagggcggtgac
accgacctgcgcgaggacgatgtcgtgcagcccgtcgccggcatcctcgacgtgctggac
aactacgcgttcgtgcggacctcgggctacctggccggacccaacgacgtgtacgtctcg
atgaacatggtccgtaagaacggcctgcgccgcggtgacgcggtcaccggcgcggtccgg
gtgccccgcgagggcgagggcggtggtggcgacaagaaccagcggcagaagttcaacccg
ctggtccgcctggacaccgtcaacggcggcccggtcgaggcggccaagaaccggcccgag
ttcggcaagctgaccccgctgtacccgaatcagcggctgcggctggagaccaccccggag
aagctcagcacccggatcatcgacctgatcatgccgatcggcaaggggcagcgcgcgctg
atcgtgtcgccgcccaaggccggcaagaccacgatcatgcaggacatcgccaacgccatc
acccgcaacaaccccgagtgccacctgatggtcgtgctggtcgacgaacggcccgaagag
gtcaccgacatgcagcgctcggtcaagggcgaggtcatcgcctcgaccttcgaccggccg
ccgtcagaccacacccaggccgccgagctggccatcgagcgggccaagcgcctggtcgag
cagggcaaggacgtcgtcgtgctgctcgactcgatcacccggctgggccgcgcctacaac
aacgcctccccggcgtcgggccgcatcctctccggtggtgtggactccaccgcgctgtac
ccgcccaagcggttcctcggcgcggcccgcaacatcgaggacggcggctcgctgaccatc
atcgccaccgcgatggtggagaccggctccaccggtgacacggtgatcttcgaggagttc
aagggcaccggtaacgccgagctcaagctggaccgcaagatcgccgagcgccgggtgttc
ccggccgtcgacgtcaacccgtccggcacccgcaaggacgagctgctgctgagccccgac
gagttcgcgatcgtgcacaagctgcgccgcgtgctctccgggctcgattcgcaccaggcg
atcgacctgctgatgagccagctgcgcaagaccaagaacaactacgagttcctggtgcag
gtgtccaagaccgccccgggcggcgtcgacgccgactag
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