KEGG   Mycolicibacterium insubricum: MINS_36640
Entry
MINS_36640        CDS       T06933                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
mij  Mycolicibacterium insubricum
Pathway
mij03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mij00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MINS_36640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mij03021]
    MINS_36640
   03019 Messenger RNA biogenesis [BR:mij03019]
    MINS_36640
Transcription machinery [BR:mij03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MINS_36640
Messenger RNA biogenesis [BR:mij03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MINS_36640
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N Spore_III_AA AAA_25 NACHT Fungal_virus_P2_C VWA_2 S1CSD-TOTE-2 AAA_22
Other DBs
NCBI-ProteinID: BBZ68235
LinkDB
Position
complement(3863124..3865022)
AA seq 632 aa
MTDTDLMTATTGNGAPGGKLDNALTSMLLPELKALAGQVGVKGTSGMRKGDLIAAIRAHQ
AGGSGSPAKGAAPAKAAQAAPAAQAPATDAPAAQATDRPAAAEAPAAPTQTQVAEPASEG
GEPARRERRGASRDAGATAGEQGQQAGAGGAEGRPERTGQDGNRGNRGNGGNQGGNQANQ
GGGNQNANQGGGNQNANQGGNQNANNGSADDDDGRGGRRGRRFRDRRRRERGGPAGEGGD
TDLREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGAVR
VPREGEGGGGDKNQRQKFNPLVRLDTVNGGPVEAAKNRPEFGKLTPLYPNQRLRLETTPE
KLSTRIIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITRNNPECHLMVVLVDERPEE
VTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYN
NASPASGRILSGGVDSTALYPPKRFLGAARNIEDGGSLTIIATAMVETGSTGDTVIFEEF
KGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQA
IDLLMSQLRKTKNNYEFLVQVSKTAPGGVDAD
NT seq 1899 nt   +upstreamnt  +downstreamnt
gtgactgatacggacctcatgacggccacaaccggcaacggtgcgcccggagggaagctc
gacaacgccctgacctcgatgttgctgcccgaattgaaggcgctggccggccaggtcggc
gtcaagggcacctcggggatgcgcaagggcgacctcatcgccgctattcgcgcgcaccag
gccggtggcagcgggtcgcccgccaagggcgccgcgccggccaaggccgcacaagcggca
cccgccgcgcaggctcccgccaccgacgcccccgccgcgcaggccaccgaccgtccggcc
gccgccgaggcgccggccgcacccacccagacgcaggttgccgagcccgcgagcgaaggc
ggcgagcccgcgcgtcgcgagcgtcgcggcgcctcccgcgacgccggcgccaccgccggt
gagcaggggcagcaggccggcgccggtggcgccgaagggcgccccgagcgcaccggccag
gacggcaaccgcggcaaccgcggcaacggcggtaaccagggcggcaaccaggccaaccag
ggcggtgggaaccagaacgccaaccagggcggcggcaaccagaacgccaatcagggtggg
aaccagaacgccaacaacggcagcgccgatgacgacgacggccgcggcggccgtcggggc
cggcggttccgcgatcgtcgtcgccgggaacgcggcggtccggccggtgagggcggtgac
accgacctgcgcgaggacgatgtcgtgcagcccgtcgccggcatcctcgacgtgctggac
aactacgcgttcgtgcggacctcgggctacctggccggacccaacgacgtgtacgtctcg
atgaacatggtccgtaagaacggcctgcgccgcggtgacgcggtcaccggcgcggtccgg
gtgccccgcgagggcgagggcggtggtggcgacaagaaccagcggcagaagttcaacccg
ctggtccgcctggacaccgtcaacggcggcccggtcgaggcggccaagaaccggcccgag
ttcggcaagctgaccccgctgtacccgaatcagcggctgcggctggagaccaccccggag
aagctcagcacccggatcatcgacctgatcatgccgatcggcaaggggcagcgcgcgctg
atcgtgtcgccgcccaaggccggcaagaccacgatcatgcaggacatcgccaacgccatc
acccgcaacaaccccgagtgccacctgatggtcgtgctggtcgacgaacggcccgaagag
gtcaccgacatgcagcgctcggtcaagggcgaggtcatcgcctcgaccttcgaccggccg
ccgtcagaccacacccaggccgccgagctggccatcgagcgggccaagcgcctggtcgag
cagggcaaggacgtcgtcgtgctgctcgactcgatcacccggctgggccgcgcctacaac
aacgcctccccggcgtcgggccgcatcctctccggtggtgtggactccaccgcgctgtac
ccgcccaagcggttcctcggcgcggcccgcaacatcgaggacggcggctcgctgaccatc
atcgccaccgcgatggtggagaccggctccaccggtgacacggtgatcttcgaggagttc
aagggcaccggtaacgccgagctcaagctggaccgcaagatcgccgagcgccgggtgttc
ccggccgtcgacgtcaacccgtccggcacccgcaaggacgagctgctgctgagccccgac
gagttcgcgatcgtgcacaagctgcgccgcgtgctctccgggctcgattcgcaccaggcg
atcgacctgctgatgagccagctgcgcaagaccaagaacaactacgagttcctggtgcag
gtgtccaagaccgccccgggcggcgtcgacgccgactag

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