Mycolicibacterium insubricum: MINS_37140
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Entry
MINS_37140 CDS
T06933
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mij
Mycolicibacterium insubricum
Pathway
mij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MINS_37140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mij03019
]
MINS_37140
03009 Ribosome biogenesis [BR:
mij03009
]
MINS_37140
Enzymes [BR:
mij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MINS_37140
Messenger RNA biogenesis [BR:
mij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MINS_37140
Ribosome biogenesis [BR:
mij03009
]
Prokaryotic type
rRNA helicases
MINS_37140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Ribosomal_S11
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBZ68285
LinkDB
All DBs
Position
complement(3918035..3920206)
Genome browser
AA seq
723 aa
AA seq
DB search
MTESQPEFPGEPVSAPPAEPGEAVEPATEAEPAEAVEPAVEAEPAPAVEAEPVEPQTVAD
EPVVADEPVAEEPAPEPVAPEPVAPEPAAVAPAAAPALDGEPAFADLGIHPDVLRALTDV
GYETPSAIQAATIPALMAGSDVVGLAQTGTGKTAAFAVPILSKIDPTSSATQALVLAPTR
ELALQVAEAFGRYSAHLPRLTVLPIYGGSSYTVQLNGLRRGAQVVVGTPGRVIDHLERGT
LDLSKLDYLVLDEADEMLQMGFAEDVERILADTPEYKQVALFSATMPPAIRKITTKYLHD
PVEVTVKAKTATAENISQRYIQVAGPRKMDALTRILETEPFEAMIVFVRTKQATEEVADR
LRSRGFSAAAINGDIPQSMRERTITALKDGGLDILVATDVAARGLDVDRISHVLNYDIPH
DTESYVHRIGRTGRAGRSGTAVLFVSPRERHLLKAIEKATRSKLVEAELPTVDDVNAQRV
AKFRDSITSALSAPGLELFRRLIEDYERENDVPMADIAAALALQTRDGGEFLMSPEPPPP
PRRERDRRDGSDRGPVRRPGEGYATYRIDVGKRHKVMPGAIVGALANEGGLHRSDFGHIS
IRMDFSLVELPPKLPPETVKALRNTRIQGVPINLRPDTGGGFSRDGGRGPDRDRDRGKDR
DRGASGKRGHHKDGTSDWSSGSGKSDWSSGSGSSAGERAGRGGKAPWSKDGKPDKKSFKN
KKH
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtcccagccggagtttcccggcgaacctgtgtccgccccgccggccgaaccc
ggcgaggccgttgagcctgccaccgaggccgagcccgccgaggccgttgagcccgcagtt
gaggccgagcccgccccggccgttgaggccgagcccgtcgaacctcagaccgtggcggat
gagcccgttgttgccgacgagcccgttgccgaagagccggcgccggagcccgtcgcaccc
gagcccgtcgcacccgaacccgcagccgtcgcacccgctgcggctcccgcgctcgacggc
gaacccgccttcgccgacctcgggatccaccccgacgtgctgcgcgcgctgaccgacgtc
ggctacgagaccccgtcggcgatccaggccgccaccatcccggcgctgatggccggatcc
gacgtcgtcgggctggcgcagaccggcaccggcaagaccgcggcgttcgcggtgccgatc
ctgtcgaagatcgacccgaccagctcggccacccaggccctggtgctggcgccgacccga
gagctggcgctgcaggtcgccgaggcgttcggccggtacagcgcgcacctgccgcgcctg
accgtgctgccgatctacggcggctcgtcctacaccgtgcagctcaacggactacgccgc
ggcgcgcaggtcgtcgtcggcacccccgggcgggtcatcgaccacctggagcgcggcacc
ctggacctgtcgaagctggactacctggtgctcgacgaggccgacgagatgctgcagatg
ggcttcgccgaggacgtcgagcggatcctggccgacacccccgagtacaagcaggtcgcc
ctgttctcggccaccatgccgccggccatccgcaagatcaccaccaaatatctgcacgac
ccggtcgaggtcaccgtcaaggcgaaaaccgccaccgcggagaatatttcgcagcgctac
atccaggtcgccggaccccggaagatggatgcgctgacccggatcctggagaccgaaccg
ttcgaggcgatgatcgtcttcgtccggaccaagcaggccaccgaggaggtggccgaccgg
ttgcggtcccgcggattctctgccgcggcaatcaacggcgacatcccgcagtccatgcgg
gaacgcaccatcaccgccctcaaggacggcggcctggacatcctggtcgccaccgatgtc
gccgcccgcggtcttgacgtcgaccggatcagccacgtgctcaactacgacatcccgcac
gacaccgagtcctatgtgcaccgcatcggccggaccggtcgcgccggacggtccggtacc
gccgtgctgttcgtgtcaccgcgggaacgccacctgctcaaggcgatcgagaaggccacc
cggtccaagctggtcgaggccgagctgccgaccgtcgacgacgtcaacgcgcagcgcgtc
gcgaagttccgcgactcgatcacctcggcgctcagcgcccccggcctggagcttttccgc
cggctgatcgaggactacgagcgcgagaacgacgtcccgatggccgatatcgcggcggcg
ctggcgctgcagacccgcgacggtggggaattcctgatgtcccccgagccgcccccgccg
ccgcgccgcgagcgggaccggcgcgacggttccgatcggggcccggtgcgccgcccgggg
gagggctacgccacctaccgcatcgacgtcggcaaacggcacaaggtgatgcccggtgcc
atcgtcggcgcactggccaacgagggcggtctgcaccgcagcgacttcggccacatcagc
atccggatggacttctccctggtggaattgccgccgaagctgccgccggagacggtcaag
gcgctgcgcaacacccgtatccagggtgtgccgatcaacctgcgccccgacaccggcggc
gggttcagccgcgacggcggccggggcccggatcgcgaccgggaccgcggcaaggatcgg
gaccgcggtgcttcgggcaaacgcggccaccacaaggacggcacgtccgactggtcgtcg
ggctccggcaagtccgactggtcgtcgggctccggctcgagtgcaggcgagcgggccggc
cggggcggcaaggcgccgtggtccaaggacggcaaaccggacaagaaatcgttcaaaaac
aagaagcactga
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