Mycolicibacterium insubricum: MINS_40110
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Entry
MINS_40110 CDS
T06933
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mij
Mycolicibacterium insubricum
Pathway
mij03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MINS_40110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mij03400
]
MINS_40110
Enzymes [BR:
mij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MINS_40110
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MINS_40110
DNA repair and recombination proteins [BR:
mij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MINS_40110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
TMEM106_N
NFACT_N
DUF7577
COMM_HN
Motif
Other DBs
NCBI-ProteinID:
BBZ68582
LinkDB
All DBs
Position
complement(4243282..4244145)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEIEALAAHLRSHAVGRPIGRIDVAALSVLKTFDPPVTALYGAEVTDARRWGKYLG
LVAGDHYLITHLSRAGWLRWSDQLPAAPPKPGRGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVEDPGSIPGIAALGPDALALSEAELAAALAGNTGRIKTVLTDQKVIAGIGNAYS
DEILHAARLSPFATAGKLDDGQVAALHSAMTTVLTDAVTRLVGQRAATLKGEKRSGLQVH
ARAGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKILADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactccccgagatcgaggcgctggccgcccacctgcgcagccacgccgtcggg
cgccccatcggccggatcgacgtcgccgcgctgtcggtgctcaagaccttcgacccaccg
gtcactgcgctgtacggcgccgaggtcaccgacgcccgccggtggggcaaatacctcgga
ctggtggccggcgatcactatctgatcacccacctgtcgcgggccggctggctgcggtgg
tccgaccagctgccggccgccccacccaaaccgggccgcgggcccatcgccctgcgggtg
cacttgggcacccccggcgaggcgcccggattcgacctcaccgaggcgggcacccagaag
cggctggccgtctggctggtcgaggacccgggttcaattcccggcatcgccgccctcggc
cccgacgccttggcgctctcggaggcggagctggccgccgcgctggccggcaacaccggc
cggatcaagaccgtgctcaccgaccagaaggtcatcgcgggaatcggcaacgcctacagc
gacgagatcctgcacgcggcccggctgtcgccgttcgcgaccgccggcaagctcgacgac
ggccaggtcgccgcgctgcactcggcgatgaccacggtgctcaccgacgccgtcacccgc
ctggtcggacagcgcgccgccaccctgaagggggagaagcgatccgggctgcaggtgcac
gcccgtgccggcctgccctgcccggtgtgcggggacaccgtccgcgaggtgtccttcgcc
gacaagtcgttccagtactgcccgacgtgccagaccggcggcaagatcctcgccgaccgg
cggatgagcaaactgctcaaatag
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