Microlunatus elymi: FOE78_05840
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Entry
FOE78_05840 CDS
T06101
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mik
Microlunatus elymi
Pathway
mik03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mik00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOE78_05840 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mik03021
]
FOE78_05840 (rpoB)
03400 DNA repair and recombination proteins [BR:
mik03400
]
FOE78_05840 (rpoB)
Enzymes [BR:
mik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOE78_05840 (rpoB)
Transcription machinery [BR:
mik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOE78_05840 (rpoB)
DNA repair and recombination proteins [BR:
mik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOE78_05840 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QDP95488
UniProt:
A0A516PWC8
LinkDB
All DBs
Position
1309980..1313471
Genome browser
AA seq
1163 aa
AA seq
DB search
MAASRTASSHSKKSPISASGRISFAKIDEPLEVPNLLDLQTRSFDWLVGNDVWKARVEAD
LAAGRTDVNTKSGLEEVFEELSPIEDFSQTMSLSFRDYRFEPPKYSVEECKERDVNYAAS
LFVTAEFMNNETGEIKSQTVFIGDFPLMTDKGTFIVNGTERVVVSQLVRSPGVYFEQTPD
KTSDKEIFTAKIIPSRGAWLEFEIDKRDTVGVRLDRKRKQNVTVLLKALGWTDAQILEEF
GEYESMRLTLEKDHTSTQDEALLDIYRKLRPGEPPTREAAQTLLENYYFNPKRYDLAKVG
RYKINKKLGVGLPFDQQVLTIDDIVATIKFVVALHEGKETLPAADGSELVVEEDDIDHFG
NRRLRTVGELVQNQLRTGLSRMERVVRDRMTTQDVEAITPQTLINVRPVTAALREFFGTS
QLSQFMDDTNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHTSHYGRMCPIETPEGPNI
GLIGSLASFARVNAFGFIETPYRKVVDGVVTDQIDYLTADEEDRFDVAQANAKVDENGKF
LEERVLVRKRHGDTDEIKADEVDYIDVSPRQMVSVATAMIPFLEHDDASRALMGSNMQRQ
AVPLVKSEAPFVGTGMEYRGAVDAADVTTAKAAGVVQSVTADLVEVAQDDGNYRVYKLEK
FQRSNHGTCINQRPLVSAGQRVEVGTPIADGPCTDGGEMSLGRNLLVAFMPWEGLNYEDA
IILNQRLVQDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEMLADLDERGIVRIGA
EVGTGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIGVRVFD
RESDDELSPGVNQLVRVYVAQKRKIQDGDKLAGRHGNKGVISKILPSEDMPFLEDGTPVD
IILNPMGVPSRMNVGQVLETHLGWVGKQGWDVEGVDEPWAERLRSVGLTHVPGDSRLATP
VFDGATEGEITGLLGHTLPNQDGNRMVNSDGKARLFDGRSGEPFPDPVGVGYIYMLKLHH
LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAWALQELLTIKSDD
IPGRVKVYEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLSSDGTEVELRDSDEDTY
RASDEFGIDLSRRPGADLGVEEV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcactgcctcatcccactccaagaagtcgccaatctcggcttccggc
cgcatctcattcgccaagatcgacgaaccgctcgaagttccgaatctgctggatctgcag
acccggtccttcgactggctggtcggaaacgacgtgtggaaggcacgcgtcgaggcggat
ctggccgcaggacgtaccgacgtcaacaccaagtccggtctcgaagaggtcttcgaggag
ctgtccccgatcgaggacttctcccagaccatgtcgctgtcgttccgcgactaccgcttc
gagccgccgaagtactcggtggaggagtgcaaggagcgcgacgtcaactacgccgcatcc
ctcttcgtgaccgccgagttcatgaacaacgagaccggtgagatcaagagccagaccgtc
ttcatcggtgatttcccgctgatgacggacaaggggaccttcatcgtcaacggcaccgag
cgtgtcgtggtgtcccagctcgtccggtccccgggtgtctacttcgagcagaccccggac
aagacctccgacaaggagattttcaccgccaagatcatcccgtcccggggtgcctggctg
gagttcgagatcgacaagcgcgacaccgtcggtgtccggctggaccgcaagcgcaagcag
aacgtcaccgtgctgctgaaggcgctcggctggaccgacgcgcagatcctggaggagttc
ggcgagtacgagtccatgcggctcaccctggagaaggaccacacctccacccaggacgag
gcgctgctggacatctaccgcaagctccgtccgggcgagccgccgacccgcgaggccgcc
cagaccctgctggagaactactacttcaatccgaagcggtacgacctggccaaggtcggt
cggtacaagatcaacaagaagctgggcgtcgggctgccgttcgaccagcaggtgctgacc
atcgacgacatcgtcgccaccatcaagttcgtggtcgcgctgcacgagggcaaggagacc
ctacccgcggccgacggcagcgaactggtggtcgaagaggacgacatcgatcacttcggc
aaccgccggctgcggaccgtcggcgagctggtgcagaaccagctgcgtaccggtctgtcc
cggatggagcgcgttgtccgagaccggatgaccacccaggacgtcgaggccatcaccccg
cagacgttgatcaacgtccgcccggtgaccgcggcgctgcgggagttcttcggcacctcc
cagctgtcccagttcatggacgacaccaacccgctggccgggttgacccacaagcgccgg
ttgtcggcgctgggtccgggtggtctgtcccgtgaccgggccggcatggaggtccgtgac
gtgcacacctcgcactacggccggatgtgcccgatcgagaccccggaaggcccgaacatt
ggcctgatcggctcgctcgcctccttcgcccgggtgaacgccttcggcttcatcgagacc
ccgtaccgcaaggtcgtcgacggcgtggttaccgaccagatcgactacctgaccgccgac
gaggaagatcgtttcgacgtcgcccaggccaacgccaaggtggacgagaacggcaagttc
cttgaggagcgggtgctggtccgcaagcggcacggcgacaccgacgagatcaaggccgac
gaggtcgattacatcgacgtctcgccgcggcagatggtctcggtggccaccgcgatgatc
ccgttcctggagcacgacgacgcctcccgtgcgttgatgggctccaacatgcagcgccag
gcggtgccgctggtcaagtctgaggcgccgttcgtcggcaccgggatggagtaccgcggt
gcggtcgacgcggccgacgtcaccacggcgaaggccgccggtgtggtccagtccgtcacc
gccgacctggtcgaggtcgcgcaggacgacggcaactaccgggtctacaagctggagaag
ttccagcggtccaaccacggcacctgcatcaaccagcgtccgctggtctccgccggtcag
cgggtcgaggtcggtacgccgatcgccgacggtccctgcaccgacggtggcgagatgtcg
ctgggccgcaacctgctggtcgccttcatgccctgggagggtctgaactacgaggacgcg
atcatcctcaaccagcggctggtccaggacgacgtcctcacctcgatccacatcgaggag
cacgaggtcgacgcccgcgacaccaagctcggtgccgaggagatcacccgcgacatcccg
aacgtcagcgaggagatgctggccgacctggatgagcgcggcatcgtccggatcggtgcc
gaggtcggcaccggcgacatcctggtcggcaaggtcaccccgaagggcgagaccgagctg
acgccggaggagcgactgctgcgggcgatcttcggtgagaaggcccgtgaggtccgcgac
acctcgctgaaggtcccgcacggcgagtccggcaccgtgatcggtgtgcgcgtcttcgac
cgcgagtccgacgacgagttgtccccgggcgtcaaccagctggtccgggtgtacgtggcc
cagaagcggaagatccaggacggcgacaagctcgccggccggcacggcaacaagggcgtc
atctccaagatcctgccgagcgaggacatgccgttcctggaggatgggaccccggtcgat
atcatcctgaacccgatgggcgtgccgagccggatgaacgtcggtcaggtgctggagacc
cacctcggttgggtcggcaagcagggctgggacgtcgagggcgtcgacgagccctgggcc
gagcggctgcgttcggtcggtctgacccacgtgccgggtgattcccggttggcgacgccg
gtgttcgacggcgcgaccgagggcgagatcaccggtctgctcgggcacacgctgcccaac
caggacggcaatcggatggtcaactccgacggcaaggcgcggctgttcgacggccgctcc
ggtgagccgttcccggatccggtgggtgtcggctacatctacatgttgaagctgcaccac
ctggtcgacgacaagatccacgctcgctcgaccggcccgtactcgatgatcacccagcag
ccgctcggtggtaaggcgcagttcggtggccagcggttcggcgagatggaggtctgggcc
ctggaggcgtacggcgctgcctgggctctgcaggagctgctgaccatcaagtccgacgac
atcccgggccgggtcaaggtgtacgaggccatcgtcaagggcgagaacatccccgaaccg
ggcatccccgagtcgttcaaggtgctggtgaaggagatgaagtccctctgcctgaatgtc
gaggtgctgagctccgacgggaccgaggtggagctgcgggattccgatgaggacacctac
cgcgcctccgacgagttcggtatcgacctgtcgcgccgtcccggcgccgacctcggagtc
gaagaagtctga
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