Microlunatus elymi: FOE78_05845
Help
Entry
FOE78_05845 CDS
T06101
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mik
Microlunatus elymi
Pathway
mik03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mik00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOE78_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mik03021
]
FOE78_05845
03400 DNA repair and recombination proteins [BR:
mik03400
]
FOE78_05845
Enzymes [BR:
mik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOE78_05845
Transcription machinery [BR:
mik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOE78_05845
DNA repair and recombination proteins [BR:
mik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOE78_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QDP95489
UniProt:
A0A516PWF4
LinkDB
All DBs
Position
1313598..1317455
Genome browser
AA seq
1285 aa
AA seq
DB search
MLDVNFFDTIRIGLASADEIRAWSFGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITSVDDEARHRDLSSLEAKIDTERKQLEGRRDSDIETRMKKLETD
MAQLEAEGAKSDVKRKVREGAEREVKQLRDRAQRELDRLDAVWTRFKNLKVQDLEGDEIL
YREMKNRFGKYFEGSMGADAIQKRLQTFDLHAEAANLRETIQTGKGQRKTRALKRLKVVS
AFLSTRNAADAMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLDDLNHAQNIKSAKRMVERQR
PVVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPADGRPVTMPTQDMIIGGYYLTMDRDDVEGAGR
VFGSVAEAQMAFDLHEIAVQAPVKIRMRDIVPPAGAELRPDGTILLDTTLGRALFNEALP
DDYPFVNGEVGKKQLGAIVNDLAERYPKSEVATCLDNLKELGFHWATRSGVTVSIGDVST
PADKVEILSDYEARAEKVDTQYDRGLITEDERRQELIEIWTDATSVLGQAMEKNFSKTNP
IYMMVHSGARGNMVQMRQIAAMRGLVVNPKGEIIARPIKSNFREGLTVLEYFNSTHGGRK
GQADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLNKIIAIEENGKLVADEHVETA
VYARTLAVDVLDSDGNVLLPAGVDLGDVNIKLLIENGINTVKVRSVLTCEAATGTCAMCY
GRSLASGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEAR
TPKGKAPIAETAGRIEVEDGDRSRKLIITPDDGSDKIEIAVSRRVRMLVDEGDHVEVGQQ
LTAGTPDPQDVLRILGVRKVQEHLVEEVQTVYRTQGAEIHEKHIEIIIRQMLRRVTVIES
GDSELLAGDLVDRPSYEAANRKVVAEGGTPASGRPVLMGITKASLATESWLSAASFQETT
KVLTDAAIHGKSDSLVGLKENVILGKLIPAGTGLERYRNIRVEPTAEARAQAYSMVGYDP
FDYDFGTGSGAAVPLEEFDIGGDYR
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgatgtgaacttcttcgacacgatccggatcggtctggccagcgccgacgagatc
cgggcctggtcgttcggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
ccggagcgggacgggctgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgggtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgttccaaggtccgccgcgagcggatgggccacatcgaactggccgccccg
gtcacccacatctggtacttcaagggtgttccgagccgcctgggctacctgctggacatc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacctcggtcgac
gacgaggcgcggcaccgcgacctgtcgtcgctggaggccaagatcgacaccgagcgcaag
cagctcgagggccgccgggactcagacatcgagacccggatgaagaagctcgaaaccgac
atggcccagctcgaggccgagggcgccaagtccgacgtcaagcgcaaggtccgtgagggt
gccgagcgtgaggtcaagcagctgcgcgaccgggcccagcgtgagctggaccggctggac
gcggtctggacccggttcaagaacctcaaggtccaagacctcgagggcgacgagatcctc
taccgggagatgaagaaccggttcggcaagtacttcgagggctcgatgggtgccgacgcg
atccagaagcgcctgcagaccttcgacctgcacgccgaggcggccaacctgcgcgagacc
attcagaccggcaagggccagcgcaagacccgcgccctgaagcggctgaaggtggtgtcg
gcgttcctgtcgacccgcaacgcggccgacgcgatggtgctggactgcgtcccggtcatc
ccgccggatctgcggccgatggttcagctcgacggtggccggttcgccacctctgacctg
aacgatctgtaccgcagggtgatcaaccggaacaaccggctgaagcggcttcttgatctt
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgactcg
ctgttcgacaacggccgccgcggccgtccggtcaccgggccgggcaaccgtccgctgaag
tcgatctcggacatgctcaagggcaagcagggccggttccggcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gacgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtggagcgtcagcga
ccggtcgtctgggacgtcctagaagaggtcatcgccgagcatccggtgctgctgaaccgc
gcaccgaccctgcaccggctgggcatccaggcgttcgagccgcagctgatcgagggcaag
gccattcagatccacccgttggtgtgtacggcgttcaacgccgacttcgacggtgaccag
atggccgtacacctgccgctgagcgcggaggcccaggccgaggcccggatcctgatgttg
tcgaccaacaacatcctgaagccggccgacggacgtccggtgaccatgccgacccaggac
atgatcatcggcggctactacctgaccatggaccgcgacgacgtcgagggcgccggtcgg
gtgttcggttcggtggccgaggcgcagatggccttcgacctgcacgagatcgcagtccag
gcgccggtgaagatccggatgcgggacatcgttccgccggccggagccgagctgcgcccc
gacggcaccatcctgctggacaccacactcggccgggcgctgttcaacgaggcgctgccg
gacgactacccgttcgtcaacggcgaggtgggcaagaagcagctgggcgcgatcgtcaac
gatctggccgagcgctacccgaagtccgaggtggcgacctgcctggacaacctgaaggaa
ctcggcttccactgggccacccggtccggtgtcaccgtgtccatcggtgacgtctccacc
ccggccgacaaggtcgagatcctgtccgactacgaggctcgggcggagaaggtcgacacc
cagtacgaccgcggcctgatcaccgaggacgagcggcgccaggaactgatcgagatctgg
accgacgccaccagcgtgctcgggcaggccatggagaagaacttctccaagaccaacccg
atctacatgatggtgcactcgggtgctcgcggaaacatggtgcagatgcggcagatcgcc
gccatgcgtggcctggtggtgaacccgaagggcgagatcatcgcccggccgatcaagtcc
aacttccgtgagggtctgaccgtgttggagtacttcaactccactcacggtggtcgtaag
ggccaggccgacaccgcgctgcggaccgccgactcgggttacctgacccggcgtctggtg
gacgtcagccaggacgtgatcatccgcgaggaggattgcggcaccgagcggggtctgaac
aagatcatcgcgatcgaggagaacggcaagctggtcgccgacgagcacgtcgagaccgcg
gtgtacgcccggacgctggctgtcgacgtactggactccgacggcaacgtgctgctgccg
gccggagttgatcttggtgacgtcaacatcaagctgctgatcgagaacggcatcaacacg
gtcaaggtgcgcagcgtcctcacctgtgaggccgccaccggcacctgcgccatgtgctac
ggcaggtcgctggccagcggcaagctggtcgacgtcggcgaggctgtcggtatcgtcgcg
gcccagtccatcggtgagccggggacccagctgaccatgcggaccttccacaccggtggt
gtcgcgggtgatgacatcacccagggtctgccgcgtgtggtcgagttgttcgaggctcgt
accccgaagggcaaggcgccgatcgccgagaccgccggccggatcgaggtcgaggacggt
gatcgttcgcggaagttgatcatcacccccgacgacgggtcggacaagatcgagatcgcg
gtcagccgccgggtgcggatgctggtcgacgagggtgatcatgtcgaggtcgggcagcag
ctgaccgcaggtacgccggatcctcaggacgtgctgcgcatcctcggtgtccgcaaggtg
caggagcacctggtggaagaggtgcagaccgtgtaccgcacgcagggtgcggagatccac
gagaagcacatcgagatcatcatccggcagatgctgcgccgggtgacggtgatcgagtcc
ggcgactccgagctgctggccggcgacctggtcgaccgtccgtcgtacgaggctgccaac
cgcaaggtggttgccgagggcgggacgccggcttccggtcgtccggtgctgatgggcatc
accaaggcgtcgctggcgaccgagtcgtggctgtcggcggcctccttccaggagaccacc
aaggtgctcaccgacgccgcgatccacggcaagtccgactcgctggtcggtctgaaggag
aacgtcatcctcggcaagctgatcccggccggcaccggcctggagcgctaccgcaacatc
cgggtggagcccaccgcggaggcgcgtgcgcaggcgtactcgatggtcggctacgacccg
ttcgactacgacttcggcaccggcagcggcgctgcggtcccgctggaggagttcgacatc
ggcggcgactaccgctga
DBGET
integrated database retrieval system
