Microlunatus elymi: FOE78_10625
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Entry
FOE78_10625 CDS
T06101
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mik
Microlunatus elymi
Pathway
mik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOE78_10625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mik03019
]
FOE78_10625
03016 Transfer RNA biogenesis [BR:
mik03016
]
FOE78_10625
Enzymes [BR:
mik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FOE78_10625
Messenger RNA biogenesis [BR:
mik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOE78_10625
Transfer RNA biogenesis [BR:
mik03016
]
Prokaryotic type
tRNA degradation factors
FOE78_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
DUF5006
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QDP96292
UniProt:
A0A516PYS0
LinkDB
All DBs
Position
2357272..2359491
Genome browser
AA seq
739 aa
AA seq
DB search
MEGPGIKSAEAVIDNGALGKHVIRFESGLLAQQAAGSAAVYIDDDTMLLSATTAQSKPRD
AIDFFPLTVDVEEKMYAAGRIPGSFFRREGRPSESAILTCRLIDRPLRPLFVKGLRNEVQ
VVITVLALNPDKLYDVVAINAASMSTQLAGLPFSGPVAGVRVALIGDQWVGFPDNSQLED
ASFDMVVAGRVLPDGDVAIAMVEAESTEQTWELVRGGKTAPTEEIVAGGLDAAKPFIKAL
CDAQAELAAQFPKETAQFPIFKDYEDDVFAAVQAEAGDELDRITQIAGKHARNDAISQYK
AIVKDKLAVQFEGRDKEISGAFSALTKKIVRQRVLRDKVRIDGRGLVDIRTLSAEVGVVP
RVHGSALFQRGETQILGISTLNMLGMEQKLDNLGPETTKRYMHNYNMPPYSTGETGRVGS
PKRREVGHGALAERALVPVLPNREEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGV
PLRAPVAGIAMGLMSEEVDGQTHYVTLTDILGDEDAMGDMDFKVAGTSEFITALQLDTKL
DGIPADVLAAALRQAKDARTTILEVMAEAIDQPDEMSLYAPRIITLKIPVDKIGEVIGPK
GKVINQIQDDTGAQITIEDDGTIYVGAEEGSAAEAARSMINAIANPTMPEKGERYLGTVV
KITNFGAFVSLLPGKDGLLHISKLRPLAGGKRVEAVEDVVSVGQKLQVEISEIDDRGKLS
LVPVIEEAEGEKEAEPVDA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagggaccaggtatcaagtccgcagaggccgtgatcgacaacggcgcactcggcaag
cacgtcattcggttcgagtccgggctgctggctcagcaggccgccggctccgccgccgtc
tacatcgacgacgacaccatgctgttgtcggcaaccaccgcgcagtccaagccgcgcgac
gcgatcgacttcttcccgctgaccgtcgacgtcgaggagaagatgtacgccgcgggccgg
atccccggctcgttcttccgtcgggagggtcgcccgtccgagtcggccatcctgacctgc
cggctgatcgaccgcccgctgcgcccgctcttcgtcaagggcttgcgcaacgaggtccag
gtcgtcatcaccgtgctggcgctcaaccccgacaagctgtacgacgtggtcgcgatcaac
gcggcctcgatgtccacccagctggccgggctgccgttctccggcccggtggccggtgtc
cgcgtcgccctgatcggcgatcagtgggtcggcttcccggacaactcgcagctggaggac
gcctccttcgacatggtcgtggccggccgggtgttgcccgacggcgacgtcgccatcgcg
atggtcgaggccgagtccaccgagcagacctgggagctggtccgcggcggcaagaccgcg
ccgaccgaggagatcgtggccggtggcctggatgcggccaagccgttcatcaaggcgctc
tgcgacgcccaggccgagctggccgcgcagttccccaaggagaccgcgcagttcccgatc
ttcaaggactacgaggacgacgtgttcgccgcggtccaggccgaggccggcgacgagttg
gaccggatcacccagatcgccggcaagcacgcccgcaacgacgccatcagccagtacaag
gcgatcgtgaaggacaagcttgcggtgcagttcgagggccgggacaaggagatctccggc
gccttcagcgcgctgaccaagaagatcgtccggcagcgggtgctgcgggacaaggtccgc
atcgacggccgtgggctggtcgacatccggacgctgtcggccgaggtcggtgtggttccg
cgggtgcacggttcggcgctgttccagcgcggtgagacccagatcctgggcatctccacg
ctgaacatgctgggcatggagcagaagctcgacaacctcgggccggagaccaccaagcgc
tacatgcacaactacaacatgccgccgtactcgaccggtgagaccggccgggtcggttcg
ccgaagcggcgcgaggtcggccacggtgccctggccgagcgggcgttggtgccggtgctg
ccgaaccgggaggaattcccgtacgcgatccgtcaggtgtccgaggcgctcggctccaac
ggctccacctcgatgggctcggtctgcgcctccaccctggcgctgctgaacgccggtgtg
ccgctgcgcgccccggtcgccggcatcgcgatgggcctgatgagcgaagaggtcgacggc
cagacccactacgtcaccttgaccgacatcctcggcgacgaggacgcgatgggcgacatg
gacttcaaggtcgctggcaccagcgagttcatcaccgcgctgcagctggacaccaagctc
gacggcatcccggccgacgtgctggccgccgccctgcggcaggccaaggacgcccggacc
accatcctcgaggtgatggccgaggcgatcgaccagcccgacgagatgagcctgtacgca
ccacggatcatcaccctgaagatcccggtggacaagatcggcgaggtcatcggcccgaag
ggcaaggtgatcaatcagatccaggacgacaccggcgcccagatcaccatcgaggacgac
ggcaccatctacgtcggtgccgaggagggttcggccgccgaggccgcccgttccatgatc
aacgcgatcgccaacccgaccatgccggagaagggcgagcgttacctcggtacggtcgtc
aagatcaccaacttcggtgcgttcgtttcgttgctgcccggcaaggacggcctgctgcac
atcagcaagctgcgtccgctcgccggcggcaagcgggtcgaggcggtcgaggacgtggtc
agcgtcggtcagaagctgcaggtggagatctccgagatcgacgaccgcggcaagctgtcg
ctggtgccggtgatcgaggaggccgagggcgagaaggaagccgaaccggtcgacgcctga
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