Microlunatus elymi: FOE78_10675
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Entry
FOE78_10675 CDS
T06101
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mik
Microlunatus elymi
Pathway
mik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOE78_10675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mik03019
]
FOE78_10675
Messenger RNA biogenesis [BR:
mik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FOE78_10675
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QDP96301
UniProt:
A0A516PZ80
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Position
2367740..2369425
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AA seq
561 aa
AA seq
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MAASRLQTPPKLRHGTLRVIPLGGLGDIGRNMAALEINGQLLLIDCGVLFPEDDHPGVDL
ILPGFDAIADRLDDVVGLVLTHGHEDHIGGVPYLLRQRSDIPIIGSRLTLALVAEKVKEH
RLSGVQPRPVAEGDRVELGEFDLEFVAVNHSIPDGLAVFVRTAGGTVLHTGDFKMDQLPL
DGRLTDLRALARLGEEGVDLLMIDSTNAEVPGFTTPEKDILPALQRVFATSKQRLIVTSF
ASHVHRVQQVLDTAVAYSRKVAYVGRSMVRNMNIARDLGYLKVPENTVIELRELDNYRPD
QVVLVSTGSQGEPLSALARIANREHPAIQLEPGDTVLLASSLVPGNENAVYRVINGLTRL
GARVVHRGNALVHVSGHASAGELLYVYNLLKPANVMPVHGESRHLIANADLAVSTGVPRD
HTIIAEDGTVVDLKDHRAKAVGQIECDYIFVDGSTVGDISQSSLTDRRILGEEGFISVVA
VVNLRSKKVLSGPDIHDRGFLEDPSIYEPVRERIAQALTDALEDGVDDTHRLQQVIRRQI
GKWVSDTYRRRPMIIPVVVAV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcctctcgactgcaaaccccgcccaagcttcggcacggaacgttgcgggtgatt
ccgctcggcgggctgggggacatcggccgcaacatggcggcgctggagatcaacgggcag
ctgctgctgatcgactgcggggtgctgtttcccgaggacgaccatcccggggtcgacctg
atcctgccgggcttcgacgcgatcgcggatcgacttgacgacgtggtggggctggtgctc
acccacggtcacgaggatcacatcggcggcgtcccgtacctgttgcggcaacggtccgac
atcccgatcatcggctcccggctgacccttgcgctggtcgccgagaaggtcaaggaacat
cgcttgtccggggtccagccacgacccgtggccgagggcgaccgagtcgagctgggcgaa
ttcgatctcgagttcgtcgcggtcaaccactccatcccggacgggctggccgtcttcgta
cgcactgccggcgggaccgtgctgcacaccggcgacttcaagatggaccaactgccgctg
gacggccgactgaccgacctgcgcgccctggcccggctcggtgaggagggcgtcgatctg
ctgatgatcgactccaccaacgccgaggtgcccggcttcaccacgccggagaaagacatc
ctgccggcgctgcagcgggtcttcgcgaccagcaaacagcggctgatcgtgaccagcttc
gcctcccacgtacaccgggtacagcaggtgctcgacaccgccgtcgcgtacagcaggaag
gtcgcctacgtcggccggtcgatggtccgcaacatgaacatcgccagggatctcggctac
ctgaaggtgccggagaacaccgtgatcgagctgcgcgagctggacaactaccgacccgac
caggtggtgctcgtctccaccggttcccagggcgagccgctgtccgccctggcccggatc
gccaaccgcgagcatccggccatccaactggagcccggcgacaccgtactgctggccagt
tcactggtcccgggcaacgagaacgcggtctaccgggtgatcaacgggctgacccggttg
ggagctcgggtggtccatcgcggcaacgcgctggtgcacgtgtccggccatgccagtgcc
ggcgagctgctctacgtctacaacctgctcaagccggccaacgtgatgccggtacacggc
gaatcccggcacctgatcgccaacgccgacctggcggtgtccaccggcgtgccgcgcgat
cacacgatcatcgccgaggacggcaccgtggtggacctgaaggatcaccgggcgaaggcg
gtcggccagatcgagtgcgactacatcttcgtcgacggttccaccgtgggcgacatcagc
cagagttcactgaccgaccggcggatcctcggcgaggagggcttcatctccgtggtcgcg
gtggtgaacctgcgctccaagaaggtgctcagcggcccggacatccacgaccgcggattc
ctggaggatccgagcatctacgaaccggtacgggaacggatcgcccaagcgctgaccgat
gcgttggaggacggtgtcgacgacactcaccggctgcagcaggtgatccgccgccagatc
ggcaagtgggtcagcgacacctaccgccgccgcccgatgatcatccccgtcgtcgtcgcc
gtctga
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