Microlunatus elymi: FOE78_21345
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Entry
FOE78_21345 CDS
T06101
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mik
Microlunatus elymi
Pathway
mik03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mik00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOE78_21345
09124 Replication and repair
03420 Nucleotide excision repair
FOE78_21345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mik03021
]
FOE78_21345
03400 DNA repair and recombination proteins [BR:
mik03400
]
FOE78_21345
Enzymes [BR:
mik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOE78_21345
Transcription machinery [BR:
mik03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FOE78_21345
DNA repair and recombination proteins [BR:
mik03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FOE78_21345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDP98106
UniProt:
A0A516Q3V6
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All DBs
Position
4678923..4680560
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AA seq
545 aa
AA seq
DB search
MNQGPLVVQSDRTLLLEVDHPDAAACRIAIAPFAELERAPEHIHTYRLTPLGLWNARAAG
HDAEQVVDVLLTYSRYPVPSSLLVDVADTMDRYGRLRIEKHPTHGLVLASTDRAVLAEVI
KSAKVKGLIGARVDDDTVVVHPSERGHLKQVLLKLGWPAEDLAGYVDGEAHAIDLDEHGW
QLRPYQKDAAESFWHGGSGVVVLPCGAGKTVVGAASMAQARATTLILVTNTVSARQWRDE
LIKKTSLTADEIGEYSGAKKEIKPVTIATYQVITTKRGGVHPHLELFDARDWGLIIYDEV
HLLPAPVFRMTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLEQQGYIAP
ADCVEVRVTLTDDERMTYAVAEEDVKYRLASTADSKTEVVVDLVAKHRGQPTLVIGQYVD
QLDDLAMRLGAPLIKGETTVKQREKLYEEFRSGEIDLLVVSKVANFSIDLPSAEVAIQVS
GAFGSRQEEAQRLGRLLRPKGAGLSARFYAVVARDTVDADFAQHRQRFLAEQGYAYRILD
AADAV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaggccctcttgtcgtgcagtccgatcggaccctgctgctcgaggtcgatcat
cccgacgcggccgcctgccgaatcgcgatcgccccgttcgccgagttggagcgagcgccc
gaacacatccacacctaccggttgactccgctcgggttgtggaacgcgcgggctgccggg
catgacgccgagcaggtggtcgacgtgctgctcacctacagccgctacccggtgccgtcg
tccttgttggtcgacgtcgccgacacgatggaccggtacggccggttgcggatcgagaag
caccccacgcacggtctggtgctggccagcaccgaccgggccgtgctcgccgaagtgatc
aagagcgccaaggtcaagggactgatcggcgcccgggtcgacgacgacacggtggtcgtc
caccccagcgaacgaggccacctgaagcaggtcctgctgaagctgggctggccggccgag
gacctggccggctatgtcgacggcgaagcccatgccatcgatcttgacgagcacggctgg
cagctgcggccgtaccagaaggacgccgccgaatcgttctggcacggcggctccggagtc
gtcgtacttccttgtggagcagggaaaaccgtggtcggcgcggcctcgatggctcaagcc
cgggcgacgacgttgatcttggtcaccaacaccgtgtcggcgcggcagtggcgcgacgag
ttgatcaagaagacctcgttgaccgcggacgagatcggcgagtattccggcgccaagaag
gagatcaagccggtcaccatcgccacctatcaggtgatcaccaccaagcgcggcggcgtg
catccgcatctggaactgttcgacgcgcgcgactggggcttgatcatttacgacgaggtg
catctgctgccggcaccggtgttccggatgacggccgatctgcaggccaggcgtcggctc
gggctgaccgcgaccctggtccgggaggacggccgggaaggtgacgtgttcagcctgatc
gggccgaagcggtacgacgccccgtggaaggatctggagcagcagggctacatcgcgccg
gccgactgcgtcgaggtccgagtgaccctcaccgacgacgagcggatgacatacgcggtg
gccgaggaggacgtgaagtatcggctggcctccacagccgattccaagaccgaggtcgtt
gttgatcttgtcgccaagcatcgcggtcagccgaccctggtgatcggtcagtacgttgat
caactcgacgatctggcgatgaggctcggtgcccccttgatcaagggcgagaccacggtg
aagcagcgggagaagctgtacgaggaattccgctccggcgagatcgacctgctggtggtc
agcaaggtggcgaacttctccatcgacctgcccagcgccgaggtcgcgatccaggtgtcc
ggcgccttcggttcccggcaggaggaggcgcaacgcctgggacggctgctccgccccaag
ggagccgggctgtccgcccgcttctacgcggtggtcgcccgggacacggtcgacgccgac
tttgcccaacacagacagcgtttcctcgccgagcagggctacgcctaccgcatcctcgac
gccgccgacgcggtctga
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