Micromonospora sp. L5: ML5_0702
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Entry
ML5_0702 CDS
T01379
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mil
Micromonospora sp. L5
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mil03016
]
ML5_0702
Enzymes [BR:
mil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ML5_0702
Transfer RNA biogenesis [BR:
mil03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ML5_0702
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADU06250
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All DBs
Position
714031..714594
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AA seq
187 aa
AA seq
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MRLFAAIYPPAVVVADLTARMKGLRVAAARHARLADPANLHLTLAFLGEVPDDRLPDVKH
ALASAARTARSPRLCLAGGGRFGEGRSTVLWVDVRGEVEVLDALALSIREGLREAGLPCD
DKPFRAHLTIARPGDRVPEADVRSDVHTLHDYAGPQWTAGEVLLIRSHLGRTPRYTPVAA
WALAAGA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctcttcgcggcgatctacccacctgccgtggtcgtcgcggacctgaccgcccgg
atgaagggcctgcgggtcgcggccgcccgccacgcccgcctcgccgacccggcgaacctg
cacctcacgctcgccttcctcggcgaggtgccggacgaccggctgcccgatgtgaagcac
gcgctcgcctcggccgcccggacggctcgttccccgcggctgtgcctggccggtggcggc
cgcttcggtgagggccggtccactgtgctctgggtcgacgtgcgcggcgaggtcgaggtg
ctcgacgcgctcgccctgtcgattcgcgaggggctgcgtgaggccgggctgccctgcgac
gacaagccgttccgggcgcatctgaccatcgcccgccccggcgaccgggtgcccgaggcc
gacgtccgctcggacgtgcacacgctgcacgactacgccgggccgcagtggacggccggc
gaggtgctcctgatccgcagccacctgggccgtacgccgcgctacacccccgtcgccgcg
tgggcgctggcggcgggggcttga
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