Micromonospora sp. L5: ML5_1798
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Entry
ML5_1798 CDS
T01379
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mil
Micromonospora sp. L5
Pathway
mil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML5_1798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mil03019
]
ML5_1798
Messenger RNA biogenesis [BR:
mil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ML5_1798
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
FUT8_N_cat
DUF6479
Motif
Other DBs
NCBI-ProteinID:
ADU07329
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Position
1848715..1850481
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AA seq
588 aa
AA seq
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MSAFDVVLLLVVLLLVVVVVGAVLFGVRTLKRLSLAPAPEDPAFIAEKDRQEQSLAALRT
AADEVNSTIDVAKSAAAAARAEAAAAKAEAKAARAEARRVLDDARAEADTVLERAHKQAE
ADAEQLRATARRSGEREVAVLAATTREQAAEVERRAARMDERERLHTEEVERLAERERQL
TAATAALAAREAALAERERTLTEVEEQRRRELERVAGLTADAARAELVESIEGQAKREAA
LLVREIEADARGSAEQRARNIVVDAIQRVASEQTAESVVSVLHLPGDEMKGRIIGREGRN
IRAFESVTGVNLIIDDTPEAVLLSCFDPVRREVGRVTLEKLVLDGRIHPHRIEEVYDVAR
QEVEELCLRAAEDALVEVGITEIHPELVTLLGRLRYRTSYGQNVLKHLVETAHIAGVMAA
ELRLDVPTIKRCAFLHDIGKALTHEVEGSHAIIGADVARKYGESEDVVHAIEAHHNEVPP
QTIEAVLTQASDACSGGRPGARRESLEAYVKRLERIEEIAAGKLGVEKVFAMQAGREIRV
MVKPDDVDDIGAAVLARDVAKQIEEELTYPGQIRVTVVRESRVTEIAR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttcgacgtcgtcctcctcctggtcgtgctgctgctggtcgtggtggtggtc
ggcgccgtgctgttcggcgtgcgtaccctcaaacggctcagcctggcgcccgcgccggag
gacccggccttcatcgcggagaaggaccggcaggaacagtccctcgcggcgttgcggacg
gccgccgacgaggtgaacagcaccatcgacgtggcgaagtccgcagccgcggcggcgcgt
gccgaggcggccgccgccaaggcggaggcgaaggcggcccgggccgaggcgcggcgggtg
ctcgacgacgcccgcgccgaggcggacacggtgctggagcgggcgcacaagcaggccgag
gcggacgccgagcagttacgcgccaccgcccggcgcagcggcgagcgggaggtggcggtg
ctggccgccaccacccgggagcaggcggccgaggtggaacgccgggccgcccggatggac
gagcgggagcggctgcacaccgaggaggtggagcggctggccgagcgggagcggcagctc
accgccgccaccgcggcgctcgccgcccgggaggccgccctggccgagcgcgagcggacg
ctgaccgaggtggaggagcagcgccgccgggagctggagcgggtggccggcctgaccgcc
gacgcggcccgcgccgagctggtcgagtcgatcgaggggcaggcgaagcgggaggccgcg
ctgctggtcagggagatcgaggcggacgcccggggcagcgccgagcagcgcgcccgcaac
atcgtggtggacgccatccagcgggtcgccagcgagcagaccgcggagagcgtggtcagc
gtgctgcacctgcccggcgacgagatgaaggggcgcatcatcggccgggaggggcgcaac
atccgcgccttcgagtcggtcaccggcgtcaacctgatcatcgacgacacgcccgaggcg
gtgctgctgtcgtgcttcgacccggtacgccgggaggtcggccgggtcacgctggagaag
ctggtcctggacggccggatccacccgcaccggatcgaggaggtctacgacgtggcccgg
caggaggtggaggagctgtgcctccgggccgccgaggacgcgctggtcgaggtcggcatc
accgagatccacccggagctggtcacgctgctgggccggttgcgctaccgcacgtcgtac
gggcagaacgtgctcaagcacctggtggagaccgcgcacatcgccggggtgatggccgcg
gagctgcggctggacgtgccgacgatcaagcggtgcgcgttcctgcacgacatcggcaag
gcgctcacccacgaggtggagggcagccacgcgatcatcggcgcggacgtggcccgcaag
tacggcgagagcgaggacgtggtgcacgccatcgaggcgcaccacaacgaggtgccgccg
cagaccatcgaggcggtgctgacccaggcgtcggacgcctgctcgggcgggcggccgggc
gcgcggcgggagagcctggaggcgtacgtcaagcggctggagcggatcgaggagatcgcg
gccgggaagctgggcgtggagaaggtcttcgccatgcaggcgggccgggagatccgggtg
atggtcaagccggacgacgtggacgacatcggcgcggcggtgctggcccgggacgtggcc
aagcagatcgaggaggagctgacctatccgggtcagatccgggtgacagtggtgcgcgag
tcccgggtcaccgagatcgcccgctag
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