Micromonospora sp. L5: ML5_2261
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Entry
ML5_2261 CDS
T01379
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mil
Micromonospora sp. L5
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mil03019
]
ML5_2261
Enzymes [BR:
mil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ML5_2261
Messenger RNA biogenesis [BR:
mil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ML5_2261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
NACHT
AAA_16
DUF2968
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ADU07784
LinkDB
All DBs
Position
complement(2350860..2354855)
Genome browser
AA seq
1331 aa
AA seq
DB search
MQNPAVPAAPETARDLHRRLAPLMFRDQRRIQRRLDGVRRLRDPQRREAALAEIAAEVTR
AEARLESRRAAVPAITYPPQLPVSERKDDIAAAIRDHQVVIVAGETGSGKTTQLPKICLE
LGRGITGLIGHTQPRRLAARTVADRIADELGTELGDVVGYKVRFTDQVGDNSLVKLMTDG
ILLAELQTDRMLRQYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVVITSATIETDR
FAKHFADAEGNPAPVVEVSGRTYPVEVRYRPLVEVTEADEEDEADEENVRDQIQAIGDAV
EELAAEGPGDILVFLSGEREIRDTADALGKLVQSKRSLLGTEILPLYARLSTAEQHRVFA
AHSNRRVVLATNVAETSLTVPGIKYVVDPGTARISRYSSRLKVQRLPIEPVSQASANQRK
GRCGRTSDGICIRLYDEQDFDSRPEFTDPEILRTNLASVILQMTSIGLGDVAAFPFIDPP
DRRNVTDGVNLLHELGALDPAETDPAKRLTALGRRLAQLPVDPRLARMVLEGERNGCATE
VVVIAAALSIQDPRERPADKQAQADQAHARFADKESDFVAYLNLWRYLREKQRELSSSAF
RRMGKAEYLNYLRVREWQDIVSQLRQVLRTSDKGEGRRGAGADLPEEIDTPKVHQSLLPG
LLSHLGLKDAQKHEYLGARGARFAIFPGSALFRKPPRWVMAAELVETSRLWGRVAGRVEP
EWVEPLAQHLVKRSYSEPHWEKKQAAVMAYEKVTLYGIPIVTSRKVNFGRIDAGLSRELF
IRHALVEGDWQTHHQFWRDNQKLLTEIEELENRARRRDILVDDETIFAFYDQRIPADVVS
GRHFDSWWKKTRRERPDLLTFTRELLVNDGRGGVDEEDFPDQWRADGVTLPLTYTFDPTA
PTDGVTVDIPLPLLNQVPAESFDWQVPGLREELVIALIRSLPKPVRRNFVPVPDYARAAL
AAITPGEEPLLAALTRQLRRMTGVTVPADAWDLGRLPPHLRVTFRVLGDDDKPVAEGKDL
PALQRELRQEVRQVVAAAAPDVARTGLTEWSIGVLPRTIEQVRAGFAVTAYPALVDEGAT
VGVKVFDSAAEQEAAHWAGTRRLLRLTMPSPAKFLQGRLSNEAKLALSRNPHGSVPELIE
DAAGAAIDKLIGDAGGPAWDAEGFAALRERVRADLVDTVVEIMERVRRVLASAYAVEQRL
GATRNLAVVAALADIRNQLTGLVHKGFITETGYARLPDLLRYLTAIERRLDRLPGNPQRD
KQQQDRVAVVQKEYQDMLAALPPPRRASAAVRQIRWMIEELRVNVFAQALGTPYPVSEQR
IYRAMDDAESR
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatccagccgtacccgccgcccctgagaccgcccgcgacctgcaccgccgcctc
gcccccctgatgttccgcgaccagcgccggatccagcggcggctcgacggcgtgcgccgg
ctgcgcgacccgcagcggcgggaggcagcgctggccgagatcgcggccgaggtgacccgg
gccgaggcgcggctggagtcgcgccgcgcggccgtcccggcgatcacctacccgccgcag
ttgccggtcagcgagcgcaaggacgacatcgccgccgcgatccgcgaccaccaggtggtg
atcgtggccggtgagaccggctccgggaagacgacccagctccccaagatctgcctggag
ctggggcgcgggatcaccggcctgatcgggcacacccagccccgccggctggcggcccgc
accgtcgccgaccggatcgccgacgaactcggcaccgagctgggcgacgtggtcggctac
aaggtgcgcttcaccgatcaggtgggcgacaacagcctggtcaagctgatgaccgacggc
atcctgctggccgagttgcagaccgaccggatgctgcggcagtacgacacgctgatcatc
gacgaggcgcacgagcgcagcctcaacatcgacttcatcctcggctatctcaggcagctc
ctgccccgacggcccgacctcaaggtcgtcatcacctcggccaccatcgagaccgaccgg
ttcgcgaaacacttcgccgacgccgagggcaacccggcgccggtggtcgaggtgtccggg
cgcacgtacccggtggaggtccgctaccggccgctcgtcgaggtcaccgaggccgacgag
gaggacgaggccgacgaggagaacgtccgggaccagatccaggccatcggcgacgcggtc
gaggaactggccgccgaggggcccggcgacatcctggtgttcctcagcggcgagcgggag
atccgggacaccgccgacgcgctgggcaagctggtgcagtccaagcggtcgctgctcggc
accgagatcctgccgctgtacgcccggctgtccaccgccgagcagcaccgggtcttcgcc
gcgcactccaaccgccgggtggtgctggccacgaacgtcgcggagacctcgctgacggtg
cccggcatcaagtacgtggtggacccgggcaccgcccggatctcccgctactccagccgg
ctcaaggtgcagcggctgccgatcgagccggtctcgcaggccagcgccaaccagcgcaag
ggccgctgcgggcgtacctcggacggcatctgcatccgcctctacgacgagcaggacttc
gactcccgccccgagttcaccgacccggagatcctgcggaccaacctggcctcggtcatc
ctccagatgacctcgatcgggctcggcgacgtcgcggcgttcccgttcatcgacccgccg
gaccggcgcaacgtcaccgacggcgtgaacctgctgcacgagctgggcgcgctcgacccg
gccgagaccgacccggcgaagcggctcaccgcgctgggccggcggctggcccagctcccg
gtcgacccccggctggcccggatggtcctcgaaggcgagcgcaacggctgcgccaccgag
gtcgtggtgatcgccgccgcgctgtccatccaggatccccgggaacgcccggccgacaag
caggcccaggccgaccaggcgcacgcccggttcgccgacaaggagtccgatttcgtcgcg
tacctgaacctgtggcgctacctgcgggagaagcagcgggagctgtcgtccagcgcgttc
cgccggatgggcaaggccgaatacctcaactacctccgggtacgcgagtggcaggacatc
gtcagccagttgcgccaggtcctgcgtacctcggacaagggtgagggccggcgcggcgcc
ggcgccgacctgccggaggagatcgacaccccgaaggtgcaccagtcgctgctgcccggc
ctgctgtcgcacctcggcctcaaggacgcgcagaagcacgaatacctgggcgctcggggc
gctaggttcgcgatcttccccgggtcggcgctgttcaggaagccgccgcgctgggtgatg
gccgccgagctggtggagacgtcccggctgtgggggcgggtggccgggcgggtcgaaccg
gagtgggtcgagccgctggcccagcacctggtgaagcgcagctacagcgagccgcactgg
gagaagaagcaggccgcggtgatggcctacgagaaggtcacgctgtacggcatcccgatc
gtcacctcccgcaaggtgaacttcgggcggatcgacgcaggtctcagccgcgagctgttc
atcaggcacgccctggtcgagggcgactggcagacccaccaccagttctggcgggacaac
cagaagctgctgaccgagatcgaggagctggagaaccgggcccggcgccgcgacatcctg
gtcgacgacgagaccatcttcgccttctacgaccagcggatccccgccgacgtggtctcc
ggccggcacttcgactcgtggtggaagaagacccgccgggagcggcccgacctgctcacg
ttcacccgcgagctgctcgttaacgacggccggggcggggtcgacgaggaggacttcccg
gaccagtggcgggccgacggcgtgacgctgccgctgacgtacacgttcgacccgaccgcg
cccaccgacggcgtcactgtggacatcccgctgccgctgctcaaccaggtgccggcggag
agcttcgactggcaggtgccggggctgcgcgaggagctggtgatcgcgctgatccggtcg
ctgcccaagccggtacggcgcaacttcgtgccggtgcccgactacgcgcgcgccgcgctc
gccgcgatcacaccgggcgaggagccgctgctggccgcgctgacccggcagctgcgccgg
atgaccggggtgactgttccggccgacgcgtgggacctcggcaggctgccgccgcacctg
cgggtcacgttccgggtgctcggcgacgacgacaagccggtcgccgagggcaaggacctg
ccggcgctgcaacgcgagctgcgccaggaggtacgccaggtcgtggccgccgccgcgccc
gacgtggcccgtaccgggctgaccgagtggtcgatcggcgtgctgccgcgcaccatcgag
caggtacgcgccggcttcgcggtgaccgcgtacccggcgctggtggacgagggcgcgacg
gtcggggtgaaggtgttcgactccgccgccgagcaggaggccgcgcactgggcgggcacc
cggcggctgctgcggctgacgatgccgtcaccggcgaagttcctccaggggcggctgagc
aacgaggcgaagctggcgctgtcccgcaacccgcacggcagcgtgccggagctgatcgag
gacgcggccggcgcggcgatcgacaagctgatcggcgacgcgggcggcccggcctgggac
gccgagggcttcgccgcgctgcgcgagagggtccgcgccgacctggtggacaccgtggtc
gagatcatggagcgggtacgccgggtgctcgcttccgcgtacgcggtggagcagcggctc
ggcgccacccgcaacctcgccgtggtggccgcgctggccgacatccgcaaccagctcacc
ggcctggtgcacaagggtttcatcaccgagacggggtacgcgcgtctgcccgacctgctg
cgctacctgaccgcgatcgagcggcggctggaccggttgccgggcaacccgcagcgggac
aagcagcagcaggaccgcgtcgccgtggtgcagaaggagtaccaggacatgctggccgcg
ctgcccccgccgcgacgtgcctcggcggcggtccgccagatccgctggatgatcgaggag
ctgcgggtgaacgtcttcgcccaggccctgggaaccccctaccccgtctcggagcagcga
atctaccgagccatggacgacgccgagtcccgctga
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