Micromonospora sp. L5: ML5_2342
Help
Entry
ML5_2342 CDS
T01379
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mil
Micromonospora sp. L5
Pathway
mil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML5_2342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mil03019
]
ML5_2342
03400 DNA repair and recombination proteins [BR:
mil03400
]
ML5_2342
Enzymes [BR:
mil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ML5_2342
Messenger RNA biogenesis [BR:
mil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ML5_2342
DNA repair and recombination proteins [BR:
mil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ML5_2342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HEM4
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ADU07864
LinkDB
All DBs
Position
complement(2435703..2437334)
Genome browser
AA seq
543 aa
AA seq
DB search
MKLTTHSSSLRRAARNLFGWTALRPNQLAAMRAVMKRRDALVVLPTGAGKSAIYQIPASL
IPGPTVVISPLLALQQDQIAALNERQRPELRAVRISSDESAAQQAEAIEDIRAGRAEFLF
ITPEALSNPDRLAEVRELKPALVAIDEAHCISAWGHDFRPDYLALGHLIDGLGRPPVVAL
TATASPPVRDDIIARLRLREPEVVVSGLDRPNLFLEVAHCPTDDYRWRRLIALLRDDERP
GIIYVPTRRAAEELAERLTGAGFPAEFYHGGMPTAARHELHEAFLADRVPIMVATSAFGM
GIDKPNIAWVVHMALPDSPDSYFQEIGRAGRDGSPARVLLLWRAEDVGLQRYFSGGLPDE
KELTELAAVLRGKARNRKELRELTGLGPRKLGQYLSLLEQVGAAEPRAKQRIGAPRYAPA
AADSGRAALAEAERQQTVTRSRTDMMRAFAETTGCRGQALLAYFGEQMHEVCGHCDNCHA
GTSVAGDGAVGPFPVHSQVRHPEWGAGLVLSYEEDRMTVLFDEVGYKTLSVRVVSEQGLL
ELD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccacgcactcctccagcctgcgccgggcggcgcggaacctgttcggctgg
accgcgctgcggcccaaccagctcgccgccatgcgcgccgtgatgaagcgccgtgacgcc
ctggtggtgctgcccaccggcgccggcaagtcggcgatctaccagatcccggccagcctg
atccccgggccgactgtggtgatctcccccctgctggcgttgcagcaggaccagatcgcc
gcgctcaacgaacggcagcgcccggagctgcgcgcggtgcggatcagctcggacgagagc
gccgcccagcaggccgaggcgatcgaggacatccgcgccgggcgcgcggagttcctgttc
atcacgccggaggcgctgagcaacccggaccggctcgccgaggtccgcgagctgaagccg
gcgctggtggcgatcgacgaggcgcactgcatctccgcgtggggccacgacttccggccg
gactacctggcgctcggtcacctgatcgacggcctgggccgcccgccggtggtggcgctc
accgcgaccgcctccccgccggtacgcgacgacatcatcgcccggctgcggctgcgcgag
ccggaggtggtggtctccgggctggaccggcccaacctcttcctggaggtggcccactgc
ccgaccgacgactaccggtggcggcggctgatcgcgctgctgcgcgacgacgagcggccc
ggcatcatctacgtgccgacccggcgggcggccgaggaactggccgagcggctcaccggc
gccggtttcccggccgagttctaccacggcggcatgcccaccgcggcccggcacgagctg
cacgaggcgttcctcgccgaccgggtgccgatcatggtggccacgtcggcgttcggcatg
ggcatcgacaagccgaacatcgcctgggtggtgcacatggcgctgcccgactcgccggac
agctacttccaggagatcggccgggccgggcgcgacggatcgccggcccgggtgctgctg
ctgtggcgcgccgaggacgtcggcctccagcgttacttcagcggcggtctgccggacgag
aaggaactgaccgaactcgccgcggtgctgcgcggcaaggcccgcaaccgcaaggagctg
cgcgagctgaccggcctcggtccgcgcaagctggggcagtacctctccctgctggagcag
gtcggggccgccgagccacgggccaagcagcgcatcggcgcaccccggtacgcgccggcg
gccgccgactccggccgcgccgcgctggccgaggcggaacggcagcagacagtgacccgg
tcgcgtaccgacatgatgcgcgccttcgccgagaccaccggctgccgggggcaggccctg
ctggcgtacttcggtgagcagatgcacgaggtctgcgggcactgcgacaactgccacgcg
ggcaccagtgtggcgggtgacggcgcggtcgggccgttcccggtgcacagccaggtacgc
cacccggagtggggcgccggtctggtgctcagctacgaggaggaccggatgacggtgctc
ttcgacgaggtgggctacaagacgctgtccgtgcgcgtggtgtccgaacagggcctgctg
gagctggactag
DBGET
integrated database retrieval system
