KEGG   Micromonospora sp. L5: ML5_3958
Entry
ML5_3958          CDS       T01379                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
mil  Micromonospora sp. L5
Pathway
mil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ML5_3958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mil03400]
    ML5_3958
DNA repair and recombination proteins [BR:mil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ML5_3958
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ML5_3958
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran AAA_29 RsgA_GTPase AAA_16 nSTAND1 AAA_23 AAA_33 AAA_25 AAA_21 AAA_22 APS_kinase DnaJ_CXXCXGXG NACHT Viral_helicase1 PRK ATPase MeaB ExoX-like_C cobW NTPase_1 ScfRs
Other DBs
NCBI-ProteinID: ADU09469
LinkDB
Position
4173470..4176412
AA seq 980 aa
MADRLIIRGAREHNLRDVSLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGEPH
CPICGERISKQSPQQIVDRVLAMAEGTRFMVLAPVVRGRKGEYVDLFAELQAKGYARARV
DGVVHPLTEPPKLKKQEKHTIEVVIDRLSVKPSAKQRLTDSVEAALGLSGGLVLLDFVDL
PEDDPARERRYSEHLACPNDHPLAIEDLEPRVFSFNAPYGACPECTGLGTKKEVDPELVI
PDPERTLREGAIQPWATGHNLEYFLRLLEALGEAEHFDIDTPWRALPSRAQKTILHGSDD
QVHVRYRNKYGRERSYYTGFEGVVQWIERRHTDTESEWSRDKYEGYMRDVPCAACGGTRL
KPEVLAVTLAGKSIAEVCNLSVGEAADLLAGIELTDRQKMIAERVLKEINARLKFLLDVG
LDYLSLDRPAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLLRL
RGLGNTLIVVEHDEDTIRVADWIVDIGPGAGEHGGKIVHSGSVPALLDNTESVTGAYLAG
RKSIPTPAARRPQTPGRELVVHGAREHNLRNLTVSFPLGQLIAVTGVSGSGKSTLVNDIL
YTVLANQINGARLVPGRHTRITGLENVDKVVGVDQSPIGRTPRSNPATYTGVWDHIRKLF
AETTEAKVRGYGPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCKGARYNRET
LEVHYKGKTVAEVLDMPIEEAAEFFSAIPAIHRHLRTLVDVGLGYVRLGQPAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDIRKLLMVLEGLVDKGNTVITIEHNLDVI
KTADWLIDMGPEGGHRGGTVLATGTPEEVAEVPESHTGQFLRPILKLDGEAKGAKAATTR
AAKANGSAKSRTRKVPAGAR
NT seq 2943 nt   +upstreamnt  +downstreamnt
gtggccgaccgactgatcatccgtggcgcgcgcgagcacaacctgcgtgacgtcagtctc
gacctgccccgggacgccctgatcgtcttcaccgggctctccggttcgggcaagtcgagc
ctggcgttcgacaccatcttcgccgagggccagcgccgctacgtcgagtcgctgtcgtcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggcctc
agtcccgccgtctccatcgaccagaagtccacctcgcgcaacccgcgctccaccgtcggc
acgatcaccgaggtctacgactacctccgcctgctgttcgcccgcatcggcgagccgcac
tgcccgatctgcggcgagcggatctccaagcagagcccgcagcagatcgtcgaccgcgtc
ctggccatggccgagggcacccggttcatggtgctcgcgccggtggtgcgcggccgcaag
ggcgagtacgtcgacctgttcgccgaactccaggccaagggctacgcccgcgcccgggtc
gacggcgtggtgcacccgctgaccgagccgccgaagctcaagaagcaggagaagcacacc
atcgaggtggtgatcgaccggctcagcgtcaagccgagtgccaagcagcggctcaccgac
tcggtcgaggccgcgctcggcctgtccggcggcctggtgctgctcgacttcgtcgacctg
ccggaggacgacccggcccgggagcgccgctactccgagcacctggcctgcccgaacgac
caccccctcgcgatcgaggatctggaaccccgcgtcttctccttcaacgccccgtacggc
gcctgcccggagtgcaccggactcggcacgaagaaggaggtggaccccgagctggtcatc
cccgacccggagcgcacgctgcgcgagggcgcgatccagccctgggccaccggccacaac
ctcgaatacttcctgcggctgctggaggcgctcggcgaggccgagcacttcgacatcgac
acgccgtggcgggcgctgccgtcgcgggcgcagaagacgatcctgcacggctccgacgac
caggtgcacgtgcgctatcgcaacaagtacggccgtgagcgctcctactacaccggcttc
gagggcgtggtgcagtggatcgagcgccggcacaccgacaccgagtcggagtggtcccgg
gacaagtacgagggctacatgcgggacgtgccctgcgcggcctgcggcggcacccggctc
aagccggaggtgctcgcggtcaccctggcgggcaagagcatcgccgaggtctgcaacctc
tccgtcggcgaggcggccgacctgctcgccggcatcgagctgaccgaccggcagaagatg
atcgccgagcgggtcctcaaggagatcaacgcccggctgaagttcctgctcgacgtcggt
ctggactacctctcgctggaccgcccggccggcacgctctccggcggtgaggcccagcgc
atccggctggccacccagatcggctccggcctggtcggcgtgctctacgtgctcgacgag
ccgtcgatcggcctgcaccagcgcgacaaccaccggctcatcgagacgctgctgcggctg
cgcggcctgggcaacacgctgatcgtggtcgagcacgacgaggacaccatccgggtggcg
gactggatcgtcgacatcggcccgggcgcgggcgagcacggcggcaagatcgtgcacagc
gggtcggtgccggcgctgctggacaacaccgagtcggtcaccggggcgtacctggccggg
cggaagtccatcccgacgccggccgcccgccggccgcagacgccggggcgcgagctggtg
gtgcacggcgcgcgcgagcacaacctgcgcaacctcaccgtgagcttcccgctcggccag
ctcatcgcggtcaccggcgtgagcggctcgggcaagtcgacgctggtgaacgacatcctc
tacacagtgctcgccaaccagatcaacggcgcccggctggtgcccggccggcacacgcgg
atcaccggcctggagaacgtggacaaggtcgtcggcgtggaccagtcgccgatcgggcgg
acgccgcgctccaaccccgccacgtacaccggtgtctgggaccacatccgcaagctcttc
gccgagaccaccgaggccaaggtccgggggtacggcccgggccggttctcgttcaacgtc
aagggcgggcgctgcgaggcgtgctccggtgacggcacgatcaagatcgagatgaacttc
ctgccggacgtctacgtcccctgcgaggtgtgcaagggcgcgcgctacaaccgcgagacg
ctcgaggtgcactacaagggcaagacggtcgccgaggtgctggacatgccgatcgaggag
gcggccgagttcttctccgccatcccggccatccaccggcacctcaggacgctcgtcgac
gtcggcctcggctacgtccgcctcggccagcccgctccgacgctgtccggcggcgaggcg
cagcgcgtcaagctcgcctccgaactccagaagcgctccaccggccgcaccgtctacgtg
ctcgacgagcccaccaccggcctgcacttcgaggacatccgcaagctgctgatggtgctg
gagggcctggtcgacaagggcaacacggtcatcaccatcgagcacaacctcgacgtgatc
aagacggccgactggctcatcgacatgggccccgagggcggccaccggggcggcaccgtg
ctcgccaccggcacgccggaggaggtcgccgaggtgccggagagccacaccgggcagttc
ctgcggccgatcctcaagctcgacggcgaggccaagggcgccaaggcggccaccacccgg
gcggccaaggccaacggcagcgccaagtcgcggacccgcaaggtccccgccggggcgcgc
tga

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