Micromonospora sp. L5: ML5_3958
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Entry
ML5_3958 CDS
T01379
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
mil
Micromonospora sp. L5
Pathway
mil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ML5_3958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mil03400
]
ML5_3958
DNA repair and recombination proteins [BR:
mil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ML5_3958
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ML5_3958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_23
AAA_33
AAA_25
AAA_21
AAA_22
APS_kinase
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
PRK
ATPase
MeaB
ExoX-like_C
cobW
NTPase_1
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ADU09469
LinkDB
All DBs
Position
4173470..4176412
Genome browser
AA seq
980 aa
AA seq
DB search
MADRLIIRGAREHNLRDVSLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGEPH
CPICGERISKQSPQQIVDRVLAMAEGTRFMVLAPVVRGRKGEYVDLFAELQAKGYARARV
DGVVHPLTEPPKLKKQEKHTIEVVIDRLSVKPSAKQRLTDSVEAALGLSGGLVLLDFVDL
PEDDPARERRYSEHLACPNDHPLAIEDLEPRVFSFNAPYGACPECTGLGTKKEVDPELVI
PDPERTLREGAIQPWATGHNLEYFLRLLEALGEAEHFDIDTPWRALPSRAQKTILHGSDD
QVHVRYRNKYGRERSYYTGFEGVVQWIERRHTDTESEWSRDKYEGYMRDVPCAACGGTRL
KPEVLAVTLAGKSIAEVCNLSVGEAADLLAGIELTDRQKMIAERVLKEINARLKFLLDVG
LDYLSLDRPAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLLRL
RGLGNTLIVVEHDEDTIRVADWIVDIGPGAGEHGGKIVHSGSVPALLDNTESVTGAYLAG
RKSIPTPAARRPQTPGRELVVHGAREHNLRNLTVSFPLGQLIAVTGVSGSGKSTLVNDIL
YTVLANQINGARLVPGRHTRITGLENVDKVVGVDQSPIGRTPRSNPATYTGVWDHIRKLF
AETTEAKVRGYGPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCKGARYNRET
LEVHYKGKTVAEVLDMPIEEAAEFFSAIPAIHRHLRTLVDVGLGYVRLGQPAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDIRKLLMVLEGLVDKGNTVITIEHNLDVI
KTADWLIDMGPEGGHRGGTVLATGTPEEVAEVPESHTGQFLRPILKLDGEAKGAKAATTR
AAKANGSAKSRTRKVPAGAR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgactgatcatccgtggcgcgcgcgagcacaacctgcgtgacgtcagtctc
gacctgccccgggacgccctgatcgtcttcaccgggctctccggttcgggcaagtcgagc
ctggcgttcgacaccatcttcgccgagggccagcgccgctacgtcgagtcgctgtcgtcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggcctc
agtcccgccgtctccatcgaccagaagtccacctcgcgcaacccgcgctccaccgtcggc
acgatcaccgaggtctacgactacctccgcctgctgttcgcccgcatcggcgagccgcac
tgcccgatctgcggcgagcggatctccaagcagagcccgcagcagatcgtcgaccgcgtc
ctggccatggccgagggcacccggttcatggtgctcgcgccggtggtgcgcggccgcaag
ggcgagtacgtcgacctgttcgccgaactccaggccaagggctacgcccgcgcccgggtc
gacggcgtggtgcacccgctgaccgagccgccgaagctcaagaagcaggagaagcacacc
atcgaggtggtgatcgaccggctcagcgtcaagccgagtgccaagcagcggctcaccgac
tcggtcgaggccgcgctcggcctgtccggcggcctggtgctgctcgacttcgtcgacctg
ccggaggacgacccggcccgggagcgccgctactccgagcacctggcctgcccgaacgac
caccccctcgcgatcgaggatctggaaccccgcgtcttctccttcaacgccccgtacggc
gcctgcccggagtgcaccggactcggcacgaagaaggaggtggaccccgagctggtcatc
cccgacccggagcgcacgctgcgcgagggcgcgatccagccctgggccaccggccacaac
ctcgaatacttcctgcggctgctggaggcgctcggcgaggccgagcacttcgacatcgac
acgccgtggcgggcgctgccgtcgcgggcgcagaagacgatcctgcacggctccgacgac
caggtgcacgtgcgctatcgcaacaagtacggccgtgagcgctcctactacaccggcttc
gagggcgtggtgcagtggatcgagcgccggcacaccgacaccgagtcggagtggtcccgg
gacaagtacgagggctacatgcgggacgtgccctgcgcggcctgcggcggcacccggctc
aagccggaggtgctcgcggtcaccctggcgggcaagagcatcgccgaggtctgcaacctc
tccgtcggcgaggcggccgacctgctcgccggcatcgagctgaccgaccggcagaagatg
atcgccgagcgggtcctcaaggagatcaacgcccggctgaagttcctgctcgacgtcggt
ctggactacctctcgctggaccgcccggccggcacgctctccggcggtgaggcccagcgc
atccggctggccacccagatcggctccggcctggtcggcgtgctctacgtgctcgacgag
ccgtcgatcggcctgcaccagcgcgacaaccaccggctcatcgagacgctgctgcggctg
cgcggcctgggcaacacgctgatcgtggtcgagcacgacgaggacaccatccgggtggcg
gactggatcgtcgacatcggcccgggcgcgggcgagcacggcggcaagatcgtgcacagc
gggtcggtgccggcgctgctggacaacaccgagtcggtcaccggggcgtacctggccggg
cggaagtccatcccgacgccggccgcccgccggccgcagacgccggggcgcgagctggtg
gtgcacggcgcgcgcgagcacaacctgcgcaacctcaccgtgagcttcccgctcggccag
ctcatcgcggtcaccggcgtgagcggctcgggcaagtcgacgctggtgaacgacatcctc
tacacagtgctcgccaaccagatcaacggcgcccggctggtgcccggccggcacacgcgg
atcaccggcctggagaacgtggacaaggtcgtcggcgtggaccagtcgccgatcgggcgg
acgccgcgctccaaccccgccacgtacaccggtgtctgggaccacatccgcaagctcttc
gccgagaccaccgaggccaaggtccgggggtacggcccgggccggttctcgttcaacgtc
aagggcgggcgctgcgaggcgtgctccggtgacggcacgatcaagatcgagatgaacttc
ctgccggacgtctacgtcccctgcgaggtgtgcaagggcgcgcgctacaaccgcgagacg
ctcgaggtgcactacaagggcaagacggtcgccgaggtgctggacatgccgatcgaggag
gcggccgagttcttctccgccatcccggccatccaccggcacctcaggacgctcgtcgac
gtcggcctcggctacgtccgcctcggccagcccgctccgacgctgtccggcggcgaggcg
cagcgcgtcaagctcgcctccgaactccagaagcgctccaccggccgcaccgtctacgtg
ctcgacgagcccaccaccggcctgcacttcgaggacatccgcaagctgctgatggtgctg
gagggcctggtcgacaagggcaacacggtcatcaccatcgagcacaacctcgacgtgatc
aagacggccgactggctcatcgacatgggccccgagggcggccaccggggcggcaccgtg
ctcgccaccggcacgccggaggaggtcgccgaggtgccggagagccacaccgggcagttc
ctgcggccgatcctcaagctcgacggcgaggccaagggcgccaaggcggccaccacccgg
gcggccaaggccaacggcagcgccaagtcgcggacccgcaaggtccccgccggggcgcgc
tga
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