Micromonospora sp. L5: ML5_4775
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Entry
ML5_4775 CDS
T01379
Name
(GenBank) cellulose-binding family II
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mil
Micromonospora sp. L5
Pathway
mil00040
Pentose and glucuronate interconversions
mil01100
Metabolic pathways
mil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ML5_4775
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ML5_4775
Enzymes [BR:
mil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ML5_4775
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Motif
Pfam:
CBM_2
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ADU10251
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Position
5176992..5178353
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AA seq
453 aa
AA seq
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MTVTKKGRPWRTALVLGTTAALAALGAVTAQAAAGCRVDYRVSSEWSGGFNADVTITNLG
DAVNGWRLAWTFPAGQQVTQSWNATVTAGTSSVTATNVDWNAALPAGGSVSFGFTGSRGA
TNPAPTVFTLNGTACTGGVTPTTGAPSPTPTAPPAGVPYSNAPDGFAGAAGTTGGAAGAT
VTVTSQADLERYAASSTPYVIRVGAAITVSPYGREIPVGSNKTIVGVGRNGQIVNGGFHL
GAGTANVIIRNLTIRDTRVASDDPDDKDFDYDGIQMDTANRIWIDHNTITRMNDGLIDSR
KDTTNLTVSWNVIAEGNKAFGIGWTDNVTARITMHHNWIHDTNVRNPSTDNVQYAHFFNN
YLQNIRGYGNYSRGRTKLVIENSYYENVKDPYYRDDTAELRQSGSVCVGCTGQRETGGSA
FTPSSFYSYRLDPAAQVPALLRTYAGPQAAIGQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcacgaagaagggccggccctggcgtaccgcgctggtgctcggcacgaccgcg
gcgctggcggcgctcggcgcggtcaccgcccaggcggcggccggctgccgggtcgactac
cgggtcagcagcgagtggagcggcggcttcaacgccgacgtgacgatcacgaacctgggc
gacgcggtgaacggctggcggctggcctggacgttcccggccggccagcaggtcacccag
tcgtggaacgccaccgttacggccgggacgtcgagcgtcaccgcgacgaacgtcgactgg
aacgccgccctgccggccggggggagcgtctcgttcggcttcaccggctcgcgcggcgcc
acgaacccggcgcccacggtgttcacgctcaacggcaccgcctgcaccggcggggtcacc
ccgacgaccggcgcgccgtccccgacgccgaccgcgccgccggccggtgtgccgtactcg
aacgcgccggacgggttcgccggcgcggccggcaccacaggcggggcggccggcgccacg
gtcaccgtgaccagccaggccgacctggagcggtacgcggcgtccagcacgccgtacgtc
atccgggtcggcgcggcgatcacggtcagcccgtacggccgggagatcccggtcggctcg
aacaagacgatcgtcggagtcgggcggaacgggcagatcgtcaacggcggattccacctc
ggcgccggcaccgccaacgtcatcatccgcaacctgaccatccgcgacacccgggtggcc
tcggacgacccggacgacaaggacttcgactacgacggcatccagatggacaccgcgaac
cggatctggatcgaccacaacacgatcacgcggatgaacgacggcctgatcgacagccgg
aaggacaccacgaacctgaccgtgtcctggaacgtcatcgccgagggcaacaaggcgttc
ggcatcggctggacggacaacgtcaccgcccggatcaccatgcaccacaactggatccac
gacacgaacgtgcgcaatcccagcaccgacaacgtccagtacgcccacttcttcaacaac
tacctgcagaacatcagggggtacggcaactactcccggggccgtaccaagctggtgatc
gagaacagctactacgagaacgtgaaggacccctactaccgggacgacaccgcggaacta
cgccagagcggcagcgtctgcgtcggctgcaccggtcagcgggagaccggcggctcggcg
ttcaccccgtcgagtttctactcctaccgcctcgaccccgccgcgcaggttcccgcactg
ctgcgcacgtacgccgggccgcaggccgccatcgggcagtga
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