Micromonospora sp. L5: ML5_4844
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Entry
ML5_4844 CDS
T01379
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mil
Micromonospora sp. L5
Pathway
mil00040
Pentose and glucuronate interconversions
mil01100
Metabolic pathways
mil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ML5_4844
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ML5_4844
Enzymes [BR:
mil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ML5_4844
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ADU10320
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Position
complement(5247472..5248815)
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AA seq
447 aa
AA seq
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MRTRTAAVAALAAALVLTTAAPAPAAPGKPSRAAELIGRQTLPANDGWAAAGTGTTGGSA
AAPDRVHVVRTRAELVAALGGDNATNAADATPKIVYVAGTVDGFEGPDGTLLDCADLADP
EYSLPAYLAAYDPATWGRVNPSGPLEAARVRSVAEQTRQTQINVGSNTTIVGLRGARLTG
LTLMIDRVANVIVRNIEFADARDCFPAWSPADGDTGNWNSQYDQISVRRSEHVWIDHNTF
TDGDNPDSAQPVYFGRPWQVHDGSVDVTHTASLVTVSWNRFTGRDKVMLIGSSNTVGPDV
GRLNVTVRHNLFDGTLQRLPRVRFGQVDVHENHYRLGGPGFAYALGVGVQSALYAENNFF
TLTGDTGPADLLYDWGGTALTERGSWVRQGDRLPRPVDLLAAYNAAHDPDLGGDAGWTPT
LRAARPLPAPLVPFVVDAFAGAGRLPL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccgaaccgcagccgtcgcggcgctggccgccgcgctcgtcctcaccaccgcc
gcgcccgcgccggccgcacctggtaagccgtcccgggccgccgagctgatcggccgccag
accctcccggcgaacgacggctgggccgccgcgggcaccggcaccaccggcgggtcggcc
gccgcgccggaccgggtacacgtcgtgcgtacccgcgccgagctggtcgccgcgctcggc
ggcgacaacgccacgaacgccgccgacgccacccccaagatcgtgtacgtggccgggaca
gtcgacggtttcgaaggaccggacggcaccctgctggactgcgccgacctggccgacccg
gagtactcgctgcccgcctacctggccgcgtacgacccggcgacctggggccgggtcaac
ccgagcggaccgctggaggccgcccgggtgcgttcggtggccgagcagacccggcagacc
cagatcaacgtcggctcgaacaccactatcgtcgggctgcgcggcgcgcggctcaccggc
ctgacgctgatgatcgaccgggtggccaacgtgatcgtgcgcaacatcgagttcgccgac
gcccgggactgcttcccggcctggtcccctgccgacggcgacacgggcaactggaactcc
cagtacgaccagatctcggtgcgccgcagcgagcacgtctggatcgaccacaacacgttc
accgacggcgacaacccggacagcgcccagcccgtctacttcgggcggccctggcaggtg
cacgacggctcggtggacgtcacgcacaccgccagcctggtcaccgtgtcgtggaaccgg
ttcaccggccgggacaaggtgatgctcatcggctcgtcgaacacggtcggcccggacgtg
ggccggctcaacgtcaccgtgcggcacaacctgttcgacggcacgctgcaacgcctgccc
cgggtccggttcggccaggtcgacgtgcacgagaaccactaccggctcggcgggcccggc
ttcgcgtacgccctcggcgtcggcgtgcagtccgcgctgtacgcggagaacaacttcttc
acgctcaccggcgacaccggcccggccgacctgctctacgactggggcggcaccgcgctc
accgagcggggcagctgggtccggcagggtgaccgcctgccccggccggtggacctgctc
gccgcgtacaacgccgcccacgaccccgacctcggcggcgacgccgggtggacgcccacg
ctgcgcgccgcccggccgctgccggccccgctggtcccgttcgtcgtcgacgccttcgcc
ggcgccgggcggctgccgctctga
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