Micromonospora sp. L5: ML5_4959
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Entry
ML5_4959 CDS
T01379
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mil
Micromonospora sp. L5
Pathway
mil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML5_4959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mil03019
]
ML5_4959
03009 Ribosome biogenesis [BR:
mil03009
]
ML5_4959
Enzymes [BR:
mil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ML5_4959
Messenger RNA biogenesis [BR:
mil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ML5_4959
Ribosome biogenesis [BR:
mil03009
]
Prokaryotic type
rRNA helicases
ML5_4959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
ADU10433
LinkDB
All DBs
Position
complement(5372512..5374269)
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AA seq
585 aa
AA seq
DB search
MNAAPTPTDPALPADAEDGIAFADLGLRTELLGALSALGYEEPTPIQREAIPPLLAGQDL
LGQAATGTGKTAAFALPLLQRMPVGRAEGDPVSLVLVPTRELAVQVSEAFHRYGKDLGAR
VLPIYGGQPIGRQLRALDHGVDVVVATPGRALDHIARGTLRLGALSTVVLDEADEMLDMG
FAEDIEAILEHAPAGRQTVLFSATMPARIDGLARQHLTDPVRIRIERERPVAGEAPRVRQ
SAYIVARAHKPAALGRVLDVESPTAAIVFCRSREEVDRLTETMNGRGYRAEALHGGMSQE
QRDRVMGRLRAGTADLLVATDVAARGLDVEQLTHVVNYDVPSAPESYVHRIGRVGRAGRE
GVAITLAEPREHRMLKTIERVTGQRIAIDKIPTVADMRTRRLELTQGALRESLLEDDLDP
YRAIVESLTDEFDLVEVALAAVKLAHEATSPGSDDEEEIPQVPVRGPREGRPEAGGRGER
RGPARPRTGGTTQVFIGLGRRAGVRPQDLVGAITGETRISGRDIGSIEIADRFSLVEVPQ
GVADEIIAGLRGTTIKGRKATVRRDRDGDGPGERRDRGYERRDRR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaccgaccccgaccgaccccgcccttcccgccgacgccgaggacggcatc
gccttcgccgatctcgggctgcgcaccgagttgctgggcgcgctgtccgcgctcggctac
gaggaaccgacgccgatccagcgggaggccatccccccgttgctggccgggcaggatctg
ctgggccaggcggcgaccggtacgggcaagaccgccgcgttcgcgctgccgctgttgcag
cggatgccggtggggcgggccgagggcgacccggtgtcgctggtgctggtgccgacgcgg
gagctggccgtgcaggtctccgaggcgttccaccgctacggcaaggacctgggcgcccgg
gtgctgccgatctatggcgggcagccgatcggccggcagctgcgtgcgctcgaccacggg
gtggacgtggtggtggcgacgcccggccgggcgctggaccacatcgcccggggcacgctg
cggttgggcgcgctgagcacggtggtgctggacgaggcggacgagatgctcgacatgggc
ttcgccgaggacatcgaggcgatcctggagcacgccccggccggccggcagacggtgctg
ttctcggccaccatgccggcccggatcgacgggctggcccggcagcacctgaccgacccg
gtccgcatccggatcgagcgggagcggccggtcgccggggaggcgccccgggtgcggcag
agcgcgtacatcgtggcccgggcgcacaagccggccgcgctgggccgggtgctggacgtg
gagtcgcccaccgcggcgatcgtgttctgccgcagccgggaggaggtggaccggctcacc
gagacgatgaacggccggggctaccgggccgaggcgctgcacggcgggatgagccaggag
cagcgggaccgggtgatgggccggctgcgcgccgggacggcggacctgctggtcgccacc
gatgtggccgcccgtggcctggacgtcgagcagctcacccacgtggtcaactacgacgtg
ccgtccgccccggagtcgtacgtgcaccggatcgggcgggtcggccgggccgggcgggag
ggtgtggcgatcacgctcgccgagccgcgtgagcaccggatgctcaagaccatcgagcgg
gtcaccggccagcggatcgccatcgacaagatccccactgtcgcggacatgcgtacccgg
cggctggagctgacccagggcgcgctgcgggagagcctgctggaggacgacctcgacccg
taccgggcgatcgtggagtcgctcaccgacgagttcgacctggtcgaggtggcgctggcg
gcggtgaagctggcgcacgaggcgacgtcgccgggctcggacgacgaggaggagatcccg
caggttccggtccggggtccgcgcgagggccgcccggaggccggcgggcggggtgagcgc
cggggtccggcgcgcccgcgtaccggcggcaccacccaggtcttcatcggtctgggccgc
cgggccggggtacggccgcaggacctggtgggcgcgatcaccggggagacccggatcagt
ggccgggacatcggctcgatcgagatcgccgaccggttctcgctggtcgaggtgccgcag
ggggtcgccgacgagatcatcgcggggctgcgcggcaccaccatcaagggacgcaaggcc
acagtgcgacgggaccgggacggcgacgggcccggtgagcgccgcgaccggggctacgag
cggcgcgaccgccgctga
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