Micromonospora sp. L5: ML5_5388
Help
Entry
ML5_5388 CDS
T01379
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mil
Micromonospora sp. L5
Pathway
mil00040
Pentose and glucuronate interconversions
mil01100
Metabolic pathways
mil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ML5_5388
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ML5_5388
Enzymes [BR:
mil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ML5_5388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
ADU10859
LinkDB
All DBs
Position
complement(5816715..5818280)
Genome browser
AA seq
521 aa
AA seq
DB search
MRRPVALRLHAALATAVVGIAVAVVLPSPQASAAAGSATGYATQNGGTTGGAGGQTVRAT
TGTAIHAALCGRASSSTPIIIEVTGTINHGNTSKVSGSSCNTADGVIELKQISNVTIIGV
GSGAVFDQLGIHIRDSRNIIIRNVTVRNVKKSGSPTSNGGDAIGMESSVRNVWVDHVTLE
ASGGESEGYDGLFDMKDDTQYVTLSYSILRNSGRGGLIGSSESDRGNGYITFEHNLYENI
DSRTPLLRGGIAHMFNNHYTGLHESGINSRAGARAKVDNNYFRNSKDVLGTFYTSERGTW
QVSGNIFDNVTWSSPGSDNYPAGPNVTSTTTVSVPYSYRLDAASCVPDIVRQTAGANTGL
RVSDGNCTPQSPPPTTPGPTTPAPTTPPPGTTTPPPSGGTNLSLVSGAGADGSSKAGGTS
YGNVRDGNLSTYWSPSGSTGTVSIKWGSATTVSRVVIREPSGTSGSIGSWQLVNNDTGAV
LASGSGAGQITFGATSLKKINFKINSSGGTPRVGEFETYAS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaccagtcgcgctgcgactccacgcggcactggccacggcggtcgtgggtatc
gccgtcgccgtggtgctgccgtccccgcaggcgtcggcggcggccggcagcgccaccggc
tacgccacccagaacggcggcaccaccggcggcgcgggcgggcagaccgtacgcgccacc
accggcaccgccatccacgccgcgctctgcggtcgggccagcagcagcaccccgatcatc
atcgaggtgaccgggaccatcaaccacggcaacaccagcaaggtctccgggtcgagctgc
aacaccgcggacggtgtgatcgagctgaagcagatcagcaacgtcaccatcatcggcgtg
ggcagcggcgccgtcttcgaccagctcggcatccacatccgcgactcccgcaacatcatc
atccggaacgtgacggtgcggaacgtcaagaagtcgggctcgcccacctccaacggcggc
gacgcgatcggcatggagagcagcgtccgtaacgtgtgggtcgaccacgtcacgctcgag
gcgtccggcggggagtcggaaggctacgacggcctgttcgacatgaaggacgacacccag
tacgtgacgctgtcgtacagcatcctgcgcaactccggccgcggcggcctcatcggctcc
agcgagagcgaccgcggcaacggctacatcacgttcgagcacaacctgtacgagaacatc
gactcccgtacgccgctgctgcgcggcggcatcgcccacatgttcaacaaccactacacc
gggctgcacgagtcgggcatcaactcccgggccggggcgcgggccaaggtggacaacaac
tacttccgcaactccaaggacgtgctcggcacgttctacaccagcgagcgcggcacctgg
caggtcagcggcaacatcttcgacaacgtgacctggtcctcgcccgggagcgacaactac
ccggcgggtccgaacgtgacgtccacgaccacagtgagcgtcccgtactcgtaccggctc
gacgcggcgagctgcgtgccggacatcgtgcggcagacggcgggcgcgaacaccggcctg
cgcgtgtccgacggcaactgcacgccgcagtccccgccccccaccacgccggggccgacc
acgcccgcccccaccacgccgccgcccgggacgaccaccccgccgccgtccggcgggacc
aacctgagcctggtctccggcgccggggcggacgggtccagcaaggccggcggcaccagc
tacggcaacgtgcgcgacggcaacctgagcacgtactggtcgccgtccgggtcgaccggc
accgtctcgatcaagtggggctcggccaccaccgtgtcccgcgtggtcatccgcgagccg
tccggcacctcgggttcgatcgggtcgtggcagctcgtcaacaacgacaccggcgcggtg
ctcgcctccggcagcggggccggccagatcaccttcggcgcgacctcgctgaagaagatc
aacttcaagatcaacagctccggcggtacgccgagagtcggcgagttcgagacgtacgcc
agttag
DBGET
integrated database retrieval system
