Micromonospora sp. L5: ML5_6157
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Entry
ML5_6157 CDS
T01379
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mil
Micromonospora sp. L5
Pathway
mil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ML5_6157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mil03400
]
ML5_6157
Enzymes [BR:
mil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ML5_6157
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ML5_6157
DNA repair and recombination proteins [BR:
mil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ML5_6157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_RRN7
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADU11600
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All DBs
Position
6850364..6851224
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AA seq
286 aa
AA seq
DB search
MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPPPSAVAGRAVTGAGRYGKFLD
VRFDEGLHLVVHLARAGWLHYREAFPAATPLRPGKGPIAVRVRLDDGSGFDLTEAGTQKK
LAAYLVTDPAQVPGVAKLGPDALEADLPTFAERLRSRRGQVKGVLTDQSVLAGVGNAYSD
EILHAARLSPFAITDRLTDDQLAGLHAATRTVLGDAVRRSMGQRAAELKGEKRSGLKVHA
RKGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaacttccggaggtggaagcgctcgccggttacctgcgcgagcgtgcggtgggc
cgccgcgtcgagcggttcgaggtcgccgcgatcagcgccctgaagacgtacgatccgccg
ccgagcgcggtcgccggccgtgcggtcaccggcgccggccggtacggcaagttcctggac
gtgcggttcgacgagggtctgcacctggtggtccacctggcccgggcgggctggctgcac
taccgggaggcgttcccggcggcgaccccgctgcggcccggcaagggcccgatcgcggtg
cgggtacgcctcgacgacggctccggcttcgacctgaccgaggccggcacccagaagaag
ctggccgcctacctggtcaccgacccggcgcaggtgccgggcgtggcgaagctcgggccg
gacgcgctggaggcggacctgccgaccttcgccgaacggctgcgcagccgccggggtcag
gtgaagggcgtgctgaccgaccagtcggtgctcgccggggtggggaacgcgtactcggac
gagatcctgcacgcggcgcggctctcgccgttcgcgatcaccgaccggctcaccgacgac
cagctcgccggtctgcacgcggcgacgcggacggtcctcggcgacgcggtacgccggtcg
atggggcagcgggccgcggagctgaagggcgagaagcgttcgggcctcaaggtgcacgcc
cgcaaggggctgccgtgtccggtctgcggcgacacggtgcgggaggtctcgttcgccgat
tcgagccttcagtactgccccacctgtcagaccggtggcaagccgctggctgaccgaagg
ttgtcccgcctcgtacggtga
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