Microbacterium sp. CGR1: AKG07_01230
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Entry
AKG07_01230 CDS
T04046
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mim
Microbacterium sp. CGR1
Pathway
mim03420
Nucleotide excision repair
mim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKG07_01230
03430 Mismatch repair
AKG07_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_01230
Enzymes [BR:
mim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKG07_01230
DNA repair and recombination proteins [BR:
mim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKG07_01230
MMR (mismatch excision repair)
Other MMR factors
AKG07_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
AKV85141
LinkDB
All DBs
Position
259098..262544
Genome browser
AA seq
1148 aa
AA seq
DB search
MTAWTGAGNGISALDVAAALGLPAPTEAQQRVIESPPAPALVVAGAGSGKTETMAGRVVW
LVANGHVRRDQILGLTFTRKAAGELAERIGVRLALIDEYGRRGLLPHLPEIVASGALDRV
SRAANARQREVVRSQVLDELAARFGTGAVSTPRSAEDLLIRPKVSTYNAFADGIVREHAA
RIGRDSDVAMLSQAASWMLVRDVVLRADLPELEEIDRSVAGVVDAVQRLAGDSLDHRVDL
DRADRIALRQAEAFEPYLSNAEVATAAANLRALPALSVLVRDYIAEKERRGVLDFADQVS
GAYDIVESSPDVREDLRQQHQVVLLDEYQDTSVIQTQFLARLFRDTAVMAVGDPHQSIYG
WRGASADNLHAFARTFSEHESVGNYSLMTSWRNDRSILGVANRILGPLRRPGLDVPPLES
RPGAGPGAVEMSFPLTVDDEARAVAEWFAARRAEHDDLAKPHTGAVLFRSKRHMQTFAAA
LAAEGIPHRILGLGGLLATPEVVDVVSTLRVLHDPTAGSALIRLLVGPRFSVGVADMAAL
QQLAAELSRRDSGLLPLDDELRKRIRASRGADEALSIIDAVDVLRGLSDDYRLLAGITPD
GRSRIRAAGEMLERLRRASSLPLPDLLRLIELELRLDIELAANETRGPARIAATQLRAFT
DEVRSFLAADERGTISSLLAWLEKAESTDELVPRPEPPEPGVVQLLTIHGSKGLEWDAVA
VVRMVEGELPSRPTDTSGWFGFGVLPFALRGDSAALPTFSWIAPSDEELDAAKRQKAGIA
SLTSRSKTAPGAITVFKDAYREYQQEEERRLAYVAVTRARSHLLLTGAHWAGQKQPKKPS
PYLTEAMEILGIAPIEPVDPDENPYDGPGATLTWPLDPLGARRGVVEAAAAAVRAAADGE
PEAAPELARLLAERAARLRGTDASPPTRVPASRFKDYVTDFTGTVSSIVRPMPERPYRQT
RLGTLFHAWVERRSELVGVGQRVDEALWEVDEDDLSFVETVGGAEVSSADAADLETLQSI
FEASEWGALKPIAVEIEIDFALGGAVPGDERHIVICKLDAVYRREDRGGRIEIVDWKTGK
APRTPREREERMLQLALYRLAYHRRFGVPLEEIDVALYYVADDLVIRGDRVYSESELFQR
WSAARAAR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgtggacgggagcggggaacgggatctctgctctggacgtcgccgccgcgctc
ggtctccccgcaccgacggaggctcagcagcgggtgatcgagtcgccaccggcgccggct
ttggtggtcgcgggcgcgggcagcggaaagaccgagacgatggccggccgcgtcgtctgg
ctggtcgcgaacgggcatgtgcgacgcgatcagatcctcggcctgaccttcacgcgcaag
gccgcgggtgagctcgcggagcgcatcggcgtccgtctggcgctcatcgacgaatacggg
agacgaggactgctgccgcacctgcccgagatcgtggcgagcggtgccctcgatcgggtg
tcgagagccgcgaacgccagacagcgcgaggtcgtccgatcgcaggtgctcgacgagctc
gccgcacgtttcggcaccggggcggtctcgaccccccgttcggccgaggatctgttgatc
cgtccgaaggtctcgacctacaacgcgttcgcggatggcatcgtgcgcgagcacgcggcg
cgcatcggccgcgactccgacgtcgccatgctcagccaggccgcatcctggatgctcgtg
cgcgacgtggtgctgcgcgccgacctgccggagctggaggagatcgaccggtcggtggcg
ggggtggtcgacgcggttcagagattggccggcgactcgctcgatcaccgggtcgatctt
gaccgcgccgatcgcatcgcgctgcgccaggccgaggcgttcgagccgtacctcagcaac
gcggaggtcgcgaccgcggctgcgaacctgcgcgctcttcccgctctgtccgtcctggtg
cgcgattacatcgccgagaaggagcgccgcggagtgctggacttcgccgaccaggtcagc
ggcgcctacgacatcgtggagtcgtctcccgacgtgcgcgaggacctgcggcagcagcat
caggtggtgctgctggacgaataccaggacacctcggtgatccagacgcagttcctcgcc
cgactcttccgcgacaccgcggtgatggcggtcggggatccgcaccagtcgatctacgga
tggcgaggcgccagcgcggacaatctgcacgccttcgcgcgcaccttctccgaacacgag
agcgtcggcaactacagtctgatgacgagctggcgcaacgaccggagcatcctcggtgtc
gccaaccgcatcctcggtccgctgcgcaggcccggattggatgtgccaccgctcgagtct
cgtcccggcgccggccccggggcggtcgagatgagcttcccgctcaccgtcgatgacgag
gctcgcgcggtcgccgaatggttcgcggcgcgtcgcgcggagcacgacgacctcgcgaag
ccgcataccggagcggtgctgttccggtcgaagcggcacatgcagacgttcgcggcggcc
cttgccgcagaagggattccgcaccgcatcctggggctcgggggactcctggcgaccccc
gaggtcgtcgatgtcgtgtcgacgctgcgcgtgctgcacgatccgacggcgggctctgcg
ttgatcaggctcctcgtcggtcctcgattctccgtcggtgtcgccgacatggcggcgttg
cagcagctcgcggcggagctctcccgtcgggacagcgggctgctgccgctggacgacgag
ctccgcaaacgcatccgcgcgtcacggggggcggacgaggcgctgtcgatcatcgacgcc
gtcgacgtgctccgcggtctcagcgacgactaccgccttctcgccgggatcacgccggac
gggcgttctcgcatccgtgccgcgggcgagatgctcgaacgcctccgacgggcgtcgtcg
cttccgcttcccgatctgctgaggctgatcgagctcgagctgcgtttggacatcgagctc
gcagcgaacgagaccagagggccggcgcgtatcgcggcgacgcagctgcgcgcgttcact
gacgaggtccggtcgttcctcgccgcagacgaacgggggaccatctcgagtctcctcgcc
tggttggagaaggccgagagcacggacgagctggtgccgcggcccgagccgcccgaaccc
ggggtcgtccagcttttgacgatccacggatccaaggggctggagtgggatgcggtcgcc
gtcgtccgtatggtcgagggcgaactgccgtcgcgcccgacggacacctcaggatggttc
ggcttcggagtgctgccgttcgctctgcgaggcgacagcgcggccctgccgaccttcagt
tggatagcgccctcggacgaagagctcgatgcggcgaagcggcagaaggcaggtatcgca
tcgctgaccagcaggagcaagacagcgccgggcgcgatcacggtcttcaaggacgcctac
cgcgagtatcagcaggaggaggagcgtcgactcgcctacgtcgccgtcaccagggcgcgc
agtcatctgcttctgaccggggcccactgggcggggcagaagcagccgaagaagccgagc
ccctatctgaccgaggcgatggagattctcggaatcgctccgatcgagcccgtggatccg
gacgagaacccctacgacggccccggcgcaacgctcacctggcctctcgacccgctcggc
gctcggcgtggagtcgtcgaggcagccgccgctgccgtgcgcgcggcagccgacggggag
ccggaggccgctcccgaactggcgcgtctgctcgccgagcgcgccgcccgattgcgtggc
accgacgcatcaccgcccacccgggtgccggcctcccgcttcaaggactacgtcaccgat
ttcaccggcaccgtgtcttccatcgtccgtccgatgcctgagcggccgtatcggcagacc
cggctgggcacgctgttccacgcatgggtcgagcggcggagcgaactcgtcggcgtcggt
cagcgcgtcgacgaggcgctgtgggaggtcgacgaggatgatctctcgttcgtcgagacc
gtcggcggagcggaggtctcgtccgccgacgccgccgacctcgagaccctgcagtcgatc
ttcgaggccagcgagtggggagcgctcaagcccatcgcggtcgagatcgagatcgacttc
gcgctgggtggcgctgtgccgggtgacgaacgccatatcgtcatctgcaaactcgacgcg
gtctatcgacgcgaagatcgcggcgggcgcatcgagatcgtcgactggaagacgggcaag
gccccacgcacacctcgggaacgggaggagcggatgctgcagctcgcgctctaccgtctc
gcctaccaccgtcgtttcggagtgcccctggaggagatcgacgtggcgctgtactacgtc
gcggacgacctcgtcatccgcggtgaccgcgtctactccgagtcggagctcttccagcgc
tggagcgctgctcgggcagcccgctga
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