Microbacterium sp. CGR1: AKG07_01245
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Entry
AKG07_01245 CDS
T04046
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mim
Microbacterium sp. CGR1
Pathway
mim03420
Nucleotide excision repair
mim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKG07_01245
03430 Mismatch repair
AKG07_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_01245
Enzymes [BR:
mim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKG07_01245
DNA repair and recombination proteins [BR:
mim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKG07_01245
MMR (mismatch excision repair)
Other MMR factors
AKG07_01245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKV85144
LinkDB
All DBs
Position
264800..266521
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AA seq
573 aa
AA seq
DB search
MSALEALDDRQREAASVLRGPVAVLAGAGTGKTRVITHRIAHGVDTGAYSPSRVMAVTFT
AKAAGELRGRLRALGVEGVAARTFHAAALAQLNFFWPTLAGSPAPSIIDNKVRLLGQAAD
AMRLRPSTATLRDLASEIEWRKVSMLSIEQHASLGRTLSGVDSAQFVELQQRYEALKDER
RQLDFEDVLLACAGMLEAEPRVAASVHEQYRHFTVDEYQDVSPLQNRLLELWLGDRKDIC
VVGDASQTIYSFAGAEQRFLLEFERRHPDATVVRLETNYRSQAPILEAANALMKGRPGAL
ELVPARETFNADSPTVTAYDSERDEAEGIAAAVAARIESGASPSEIAVLYRAHAQSAVLQ
QALAAEGIATSVLGGTRFFAMPEVRQAILALRAAAVAPTEHGFLPGVQRVLRELGLSDEP
PAAGGAQRDGWEARRAILRLAEDAGPDETLRTFSDALMARAKDQHEPTMRTVTLSTLHAA
KGLEWPHVYLAGWAEGALPISYATGFEAIDEERRLAYVGVTRAARTLSLSWSRSAGRGER
APSRFLAEMGTTARGTGILRETSPSASRGAPRR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgctcgaagccctcgacgatcgacagcgggaggcggcatccgtgctgcgcggt
cccgtcgccgtgctcgcaggtgcgggaaccgggaagacccgagtgatcacccaccggatc
gcccatggcgtcgacaccggtgcatactcgccgtcgcgcgtcatggcggtgaccttcacg
gccaaagcggcgggcgagctcaggggtcgtctgcgcgcgctcggcgtcgagggcgtggcc
gcgcggacattccacgccgccgccctcgcccagctgaacttcttctggcccacactggcc
ggatcacccgctccgtcgatcatcgacaacaaggtgaggctgctcggccaggctgccgac
gcgatgcgactgcggccgagcaccgcgacgcttcgcgacctcgcctcggagatcgaatgg
cgcaaggtgtcgatgttgtcgatcgaacagcacgcgtcgctcggccgcacgttgagcggc
gtcgactccgctcagttcgtcgaactgcaacagcgctatgaagcgttgaaggacgagcgg
cgccaactcgatttcgaggacgtgctgctggcttgcgccgggatgctcgaggccgaacct
cgcgtcgcagcgtccgtgcacgagcagtatcggcatttcacggtcgacgagtaccaggac
gtctctccgctccagaaccgcctgctcgaactctggctgggcgatcgcaaggacatctgc
gtcgtcggtgacgcgagtcagaccatctactcgttcgccggcgccgaacagcgattcctc
ctcgagttcgagcggcggcatcccgatgccacggtcgtgcgtctcgagaccaactaccgt
tcgcaggccccgatcctcgaagcggcgaacgccctgatgaaggggcggccgggcgccctc
gaactcgtcccggcgagagagacgttcaacgcggattcgcccacggtcacggcgtacgac
tccgagcgcgacgaggcagaggggatcgccgccgccgtggcagcgcggatcgagtcaggg
gcgtcgccctcagagatcgccgtgctctaccgggctcatgcgcagtccgcggtgctgcag
caggcgctcgccgccgagggcatcgcgacatcggtgctgggtggaacccggttcttcgcg
atgcccgaggtgcgacaggcgatcctggccctgcgggccgccgcggtcgcgccgaccgag
cacggtttcctgcccggggtccagagggtcctccgcgagctcggtctctccgacgagcca
ccggcggccgggggagctcagcgcgacggctgggaggctcggcgggcgattctgcgtctc
gccgaagacgccggacccgatgagaccctgcgcaccttcagcgacgcgctcatggcgcgc
gcgaaggaccagcacgagcccaccatgcgcaccgtgactctgtcgacgttgcacgccgcc
aagggtctcgaatggccgcatgtctacctcgcggggtgggcggagggtgcactcccgatc
tcctacgccaccggcttcgaggcgatcgacgaagagcgccgcctcgcttacgtcggcgtc
acgcgggccgcgcgtactctctcgctgtcgtggtcgcgctcagcgggacgcggggaacgc
gccccgtcgcggttcctggcagagatgggaacgactgctcgcggcaccggcattcttcgt
gaaacgtcaccgagcgccagtcgcggcgcccctcgccgctga
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