Microbacterium sp. CGR1: AKG07_03875
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Entry
AKG07_03875 CDS
T04046
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mim
Microbacterium sp. CGR1
Pathway
mim03030
DNA replication
mim03410
Base excision repair
mim03420
Nucleotide excision repair
mim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKG07_03875
03410 Base excision repair
AKG07_03875
03420 Nucleotide excision repair
AKG07_03875
03440 Homologous recombination
AKG07_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mim03032
]
AKG07_03875
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_03875
Enzymes [BR:
mim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKG07_03875
DNA replication proteins [BR:
mim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AKG07_03875
DNA repair and recombination proteins [BR:
mim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AKG07_03875
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKG07_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AKV85570
LinkDB
All DBs
Position
complement(816991..819624)
Genome browser
AA seq
877 aa
AA seq
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MTDSAKPTLMVVDGHSLAYRAFFALPVENFTTKDNQHTNAIYGFLSMLVNLIKAEQPTHM
AIAFDTSRHSFRTDQYPEYKATRSESPQEFRGQIPLLQDCLAAMSIPVLTKEGFEADDIL
ATLSTQGAEQGYDVLVVSGDRDTIQLVTDDVTLLYPSVQGVSQLKRYDPVTVQERYGVRP
EQYPDIAALVGETSDNLPGVPKVGEKTAVKWLTQFGSLDDLLERADEIKGVVGGNLRDHI
EDVRRNRRLNRLLRDVELPVAPDDLAVAPIDAQAVRDIFARLEFRTLLPRVFEAVGAGEV
ADDPAATVVLPEPTQVTAAEFVSWADAQTGDVALRIVVQGGAPTRLGAATASELRELDWN
DDDIEVLRPWLESTRPKVLHDAKPQVKALLRLGIRLQGLAYDTSLAGWLLRPSFPDKTLS
DLVERYLGEKLPEADPSQLVPETEGATPSQEAWFALRVATALRDDIPESVAAVLTGIELP
TLLTLADMEVAGVAVSHDVLSTFSGELATRADRLAQEAFGIVGREFNLGSPKQLQEVLFD
DLQLPKTRKTKTGYSTDAAVLADLQESHPHPFLGLLLQHREATKLRQIIESLDTAIGTDH
RVHTTYVQTGSQTGRLSSTDPNLQNIPVRTEESRRIRSAFQVGEGYESLLTADYSQIEMR
IMAHLSGDEGLIEAFNSGEDLHRFVGARVFGVEPSEVTSAMRTKVKAMSYGLVYGLSAFG
LSKQLRIEQSEAKQLMVEYFARFGAVRDYLRASVMKAKEVGYTETIFGRRRPFPDLASPN
RVLRENAERAALNAPIQGSAADIMKIALLHIHEDLRSEGLASRALLQIHDELVVEVAPGE
WDAAERIVRTRMGDAADLTVPLDVQVGRGQDWNEAAH
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
gtgacggactccgcaaagcctaccctcatggtcgtcgacggccattcgctcgcctatcgt
gccttcttcgccctcccggtcgagaacttcacgacgaaggacaatcagcacacgaacgcc
atctacggcttcctgtcgatgctggtgaacctcatcaaggccgagcagccgacgcacatg
gcgatcgcgttcgacacctcccgtcattcgttccgcaccgatcagtaccccgaatacaag
gcgacgcggtcggagtccccgcaggagttccggggtcagatcccgctgctgcaggactgc
ctcgcggcgatgtcgatcccggtgctcaccaaagagggcttcgaggccgacgacatcctc
gcgacgctctcgacgcagggcgcggagcagggatacgacgtcctggtggtctccggagac
cgcgacacgatccagctggtcaccgacgacgtcacgctgctgtacccgtccgtgcagggc
gtctcgcagctcaagcgctacgacccggtgaccgtgcaggaacgctacggagtgcggccc
gagcagtatcccgatatcgcggctctcgtgggcgagacgagcgacaatctccccggcgtg
cccaaggtgggggagaagaccgccgtcaagtggctgacgcagttcggttcgctcgacgac
ctgctcgagcgagccgatgagatcaagggggtcgtgggcggcaacctgcgcgatcacatc
gaggacgtgcgccgtaaccgtcggctcaaccgactgctgcgcgacgtcgagcttcccgtc
gctcccgacgacctcgcggtcgccccgatcgacgctcaggccgtgcgcgacatcttcgcc
cgcctcgagttccgcaccctgctgccccgtgtcttcgaagcagtcggcgccggtgaggtc
gccgacgatccggccgcgacggtggtgctgcccgaaccgacgcaggtcaccgcagcagag
ttcgtcagctgggccgacgcgcagacgggcgacgtcgcactgcgtatcgtcgtgcagggc
ggggcaccgacgcgtctcggcgccgcgaccgcgagcgagctccgcgaactcgactggaac
gatgacgacatcgaggtgctgagaccgtggctcgagtcgacgcgccccaaggtgctgcat
gatgcgaagccccaggtgaaggcgctgctgcgcctcggcatccgactccagggactcgct
tacgacaccagtctcgccggctggctgctgcgaccgagcttccccgacaagaccctgtcc
gacctcgtcgaacggtatctcggagagaagctgcccgaggcggatccctcgcagctcgtg
ccggagacggagggcgccaccccatcgcaggaggcctggttcgcgctccgcgtcgccacg
gctctgcgtgacgacatccccgagtcggtcgccgctgtgctcaccggcatcgagcttccg
accctgctcaccctggccgacatggaggtcgcgggagtcgcggtgtcgcacgacgtcctc
tcgacgttctcgggcgagctggcgacgcgcgcggaccgcctcgcacaggaggcgttcggg
atcgtcggtcgcgagttcaatctcggatctccgaagcagctccaggaggtgctgttcgac
gacctgcagctgcccaagacccgcaagacgaagaccggatactccacggatgctgcggtg
ctcgccgatctccaggagtcgcatccgcatcctttcctcggtctgctgctgcagcaccgt
gaggccacgaagctccgtcagatcatcgagtcgctcgacaccgcgatcggaaccgatcac
cgtgtgcacacgacgtatgtgcagaccggaagccagaccgggcgcctgtcgagcacagac
ccgaacctgcagaacatcccggtgcgcaccgaggagtcgcgtcgcatccgcagcgcgttc
caggtgggagaggggtacgagtcgctgctcaccgccgactactcgcagatcgagatgcgc
atcatggcccatctgtccggcgacgaaggcctcatcgaggcgttcaacagcggtgaggac
ctccaccgcttcgtcggcgcgcgagtgttcggggtcgaaccgagcgaggtgacgtccgcg
atgcgcacgaaggtgaaggcgatgtcctacggcctcgtctacggtctctccgcgttcggc
ctgtcgaagcagctccgcatcgagcagtccgaggcgaagcagctgatggtcgagtacttc
gcgcggttcggagcggtacgcgactacctccgggcatctgtcatgaaggccaaagaggtc
ggctacaccgagaccatcttcggacggcggcgacccttccccgacctcgcgagccccaac
cgcgtgctgcgcgagaacgcagagcgcgcagcgctcaacgcaccgatccagggcagcgcg
gccgacatcatgaagatcgcgctgctgcacatccacgaagacctcaggtcggagggactc
gcctcgcgtgcgctgctgcagatccacgacgaactcgtcgtcgaggtcgcaccgggggag
tgggacgcggccgagcggatcgttcggactcgcatgggcgatgcggcggatctcaccgtg
ccgctcgacgtgcaggtcgggcgcgggcaggactggaacgaggcggcgcactga
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