Microbacterium sp. CGR1: AKG07_04260
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Entry
AKG07_04260 CDS
T04046
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mim
Microbacterium sp. CGR1
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_04260
Enzymes [BR:
mim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AKG07_04260
DNA repair and recombination proteins [BR:
mim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AKG07_04260
Prokaryotic type
AKG07_04260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKV85635
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All DBs
Position
902375..903724
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AA seq
449 aa
AA seq
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MASPSLVWLRDDLRLADNPALRAAIDRGEPLVVLFVLDEESPGIRPLGGAARWWLHHSLA
SLDDALRELGATLTLRRGPAERIVRETVADSGATAVFWNRRYGGAEREVDTALKAALRAD
GHEVTSFQASLLHEPWTVKTGGGTHFSVFTPFWRACLSLPTPRAPLPAPRSLAGVPQPPA
SDDLVDWNLLPTRPDWAGGLRDAWEPGEPAARARLRTFLHDDIGSYDRARDEPSAGATSL
LSPRLRWGELSPFTVWHAAVEADGAAGFLSELGWREFAWHTTFHAPDIATKNLRRQYDAF
PWPRLKPSELEAWQRGDTGIPLVDAGMRELWHTGFMHNRVRMVTASFLVKNLLIDWRRGE
EWFWDTLVDADGASNPFNWQWVAGSGADAAPYFRVFNPELQAKKFDPHGLYISEWASDAP
TEPIVDLAATRKAALAAYEVVKRSSPVSG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccctcgctcgtctggctccgcgacgaccttcgactcgccgacaatccggcg
ctcagggcggcgatcgatcgcggtgaaccactggtcgtgctgttcgtcctcgacgaggag
tcccccggcatccgaccgctcggcggagccgcacgctggtggctccaccactccctcgcg
tctttggacgatgcgctgcgggaactcggcgccactctgacgctgcgtcgaggtcctgcc
gaacgcatcgtccgcgagaccgtcgcagactccggcgcgactgccgtgttctggaaccgg
cgatacgggggcgccgaacgcgaggtcgacaccgcgctcaaggcggcgctgcgtgcggac
ggccacgaggtcacgtcgttccaggcgtcgctgctgcacgaaccgtggacggtgaagacc
ggcggcggcacccacttctcggtgttcacgccgttctggcgggcatgcctctccctcccc
acgccgcgagcgcccctccctgcgccccggagtctcgctggggtgccccagcccccggcg
tccgacgatctcgtcgactggaatctgctgccgacccgccccgactgggcgggcggactc
cgcgacgcctgggagcccggtgagccggcggccagagctcggctgcgtacgttcctgcat
gacgacatcggctcgtacgatcgcgcgcgggacgagccgtcggcgggcgcgacgtcactg
ctgtcaccgcgtctgcgctggggcgagctgagcccgttcaccgtgtggcacgcggcggtg
gaggccgatggcgcggccgggttcctctcggagttgggctggcgcgaattcgcctggcac
acaacgttccacgcaccggacatcgccacgaagaacctccgccgtcagtacgacgccttc
ccctggccgcggctcaagccgtcggaactcgaggcgtggcagcgcggcgataccgggatc
ccgctcgtcgatgcggggatgcgcgaactgtggcacacgggtttcatgcacaaccgggtg
cgcatggtgacggcctcgttcctcgtgaagaacctgctcatcgactggcggcgcggcgag
gagtggttctgggacaccctggtcgacgccgacggcgcgagcaacccgttcaactggcag
tgggtggcaggatccggcgccgacgccgccccgtacttccgcgtcttcaatcccgagctg
caggcgaagaagttcgacccgcacggcctgtacatctcggagtgggcgtcggatgccccg
acagagccgatcgtcgatctcgcggccacccgcaaagcggcgctcgcagcgtacgaggtc
gtcaagcggtcgtccccggtctcggggtga
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