Microbacterium sp. CGR1: AKG07_04335
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Entry
AKG07_04335 CDS
T04046
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mim
Microbacterium sp. CGR1
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mim03016
]
AKG07_04335
Enzymes [BR:
mim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AKG07_04335
Transfer RNA biogenesis [BR:
mim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AKG07_04335
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKV85645
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Position
912075..913268
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AA seq
397 aa
AA seq
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MTEYSVISDVSEFHAACAALAAGTGPVAVDVERASGFRYSQRAYLVQVFRRDAGVFLFDP
PALGDFSPLQQAIGDALWVFHAASQDLPSLRELDLLPHTIFDTELASRLLGHDRVGLAAV
VENTLGITLKKEHSAADWSTRPLPAAWLEYAALDVLHLIDVYEALEAELEEQGKTEYAAE
EFAATLARLPKPPREDPWRRLSGLHQVRGARNLAVARSLWQARESFAQDQDVSPGRLVPD
RSLIAAVLANPQSKQALAGIKEFQGRASRTQLDRWWQAMVDGRATEELPRERVPSDTLPP
PRAWSDRNPEADARLKAARPVVEATAEELGMPTENLLTPDHLRRVAWDVPGTTPEAIGEA
LAALGARPWQIAQTAQKIADAFVEAAQTPDEASAPAS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaatactccgtgatctccgacgtctcggagttccacgcggcatgcgccgcactg
gccgcaggaaccgggcctgtcgccgtggacgtcgagagggcatccggattccgctactcc
cagcgcgcctatctcgtgcaggtgttccgccgcgacgcgggggtcttcctgttcgaccct
cccgctctcggcgacttcagccctctgcagcaggccatcggcgacgccctgtgggtgttc
cacgccgccagccaggatcttccgtctctgcgcgaactcgatctactcccccacacgatc
ttcgacacggagctcgcatcgcgactgctgggtcatgaccgagtcggactcgccgcggtc
gtcgagaacacgctcgggatcacgctcaagaaggagcactccgcggcggactggtcgacc
agaccccttcccgctgcatggctcgagtacgcggcactcgatgtgctgcacctcatcgac
gtctacgaggctctggaggcggagctcgaggagcaggggaagaccgagtacgcggccgag
gagttcgccgccacgctcgcccgactgccgaagcctcctcgcgaagacccctggcgacga
ctcagcggactgcaccaggtgcgcggcgcgcggaacctcgcggtcgctcgctcgctgtgg
caggctcgcgagagcttcgcccaggatcaggacgtctctcccggccgtctggtgccggac
cgatcgctcatcgcggccgtgctggcgaacccgcagagcaagcaggcgctcgcagggatc
aaggagttccagggccgagcgagccgcacccagctcgaccgctggtggcaggcgatggtc
gacggacgtgccacggaggagcttccccgggagcgggttcccagcgatacgctgccgccg
ccgcgagcctggtccgatcgcaatccggaggccgacgcgcgactcaaagccgcccgcccg
gtcgtcgaggccacggccgaggaactcgggatgccgaccgagaacctgctcacccccgat
cacctgcgccgtgtggcgtgggatgtaccgggaacgacgcccgaggccatcggcgaggca
ctcgccgcactgggtgcccgcccgtggcagattgcacagactgcacagaagatcgcggac
gcctttgtagaggcggcgcaaacccccgacgaggcgtccgcaccggcttcgtag
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