KEGG   Microbacterium sp. CGR1: AKG07_04460
Entry
AKG07_04460       CDS       T04046                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
mim  Microbacterium sp. CGR1
Pathway
mim02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mim00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AKG07_04460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mim03021]
    AKG07_04460
Transcription machinery [BR:mim03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AKG07_04460
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DBD_HTH
Other DBs
NCBI-ProteinID: AKV85665
LinkDB
Position
complement(942808..944040)
AA seq 410 aa
MTPATTKKTRTKKTADAPEVDAPVEEAAEKPAPKTAAQRAAAKRAPAKKKKADDIVEDDE
TPPAAEPDEDDEDSKPKFTEPLPTGAIVISSNDDEDVPVYSTQITGATADPVKDYLKQIG
KVALLNAAEEVELAMRIEAGLFAEEKLSTMTAAEKASQLGLDLQWVARDGQRAKSHLLGA
NLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRA
MADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVVEVQKYGR
EPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLEQLLDSLSEREAGVIRMR
FGLGDGQPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq 1233 nt   +upstreamnt  +downstreamnt
gtgactcctgccacgacgaagaagacccggacgaagaagaccgccgacgctcccgaggtc
gatgctccggtcgaggaggccgctgagaagccggcgcccaagaccgccgcgcagcgtgcc
gctgccaagcgcgcgcccgcgaagaagaagaaggccgatgacatcgtcgaagacgacgag
actcctcccgccgcagagcccgatgaggacgatgaggactccaagccgaagttcaccgag
cctctgcccacgggagcgatcgtcatctcgtcgaacgacgacgaagacgtgcccgtttac
tccacgcagatcaccggtgcgaccgccgaccctgtcaaggactacctgaagcagatcgga
aaggtcgccctgctgaacgcggccgaagaggtcgagctcgcgatgcgcatcgaggccggc
ctgttcgccgaggagaagctctccacgatgacggccgccgagaaggccagccagctcggg
ctcgacctgcagtgggtcgcccgcgacggtcagcgcgcgaagagccacctgctcggcgcg
aacctccgtctcgtcgtctcgctcgccaagcgctacaccggccgcggcatgcagttcctg
gacctgatccaggagggcaacctcggtctgatccgcgccgtcgagaaattcgactacacc
aagggcttcaagttctcgacgtacgccacctggtggatccgtcaggcgatcacccgcgcg
atggcagaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaag
ctcgcccgagtgcagcgccagatgctgcaggacctgggccgtgagcccacgcccgaagag
ctcagccgcgagctggacatgacacccgagaaggtcgtcgaggtgcagaagtacggccgc
gagccgatctccctgcacacgcctctcggtgaggacggcgacagcgagttcggtgacctc
atcgaggacaccgaggcagtggtccccgcggatgccgtgggcttcacgatgctgcagcgt
cagctggagcagctgctcgactcgctctccgagcgtgaggccggtgtcatccggatgcgc
ttcggactcggcgacggacagcccaagaccctcgaccagatcggtgacacgttcggcgtg
acgcgtgagcgcatccgtcagatcgagtcgaagacgatggcgaagctccgccacccgagc
cgctcgcagtcgctgcgggactacctcgagtga

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