Microbacterium sp. CGR1: AKG07_04460
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Entry
AKG07_04460 CDS
T04046
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
mim
Microbacterium sp. CGR1
Pathway
mim02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AKG07_04460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mim03021
]
AKG07_04460
Transcription machinery [BR:
mim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AKG07_04460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
AKV85665
LinkDB
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Position
complement(942808..944040)
Genome browser
AA seq
410 aa
AA seq
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MTPATTKKTRTKKTADAPEVDAPVEEAAEKPAPKTAAQRAAAKRAPAKKKKADDIVEDDE
TPPAAEPDEDDEDSKPKFTEPLPTGAIVISSNDDEDVPVYSTQITGATADPVKDYLKQIG
KVALLNAAEEVELAMRIEAGLFAEEKLSTMTAAEKASQLGLDLQWVARDGQRAKSHLLGA
NLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRA
MADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVVEVQKYGR
EPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLEQLLDSLSEREAGVIRMR
FGLGDGQPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctgccacgacgaagaagacccggacgaagaagaccgccgacgctcccgaggtc
gatgctccggtcgaggaggccgctgagaagccggcgcccaagaccgccgcgcagcgtgcc
gctgccaagcgcgcgcccgcgaagaagaagaaggccgatgacatcgtcgaagacgacgag
actcctcccgccgcagagcccgatgaggacgatgaggactccaagccgaagttcaccgag
cctctgcccacgggagcgatcgtcatctcgtcgaacgacgacgaagacgtgcccgtttac
tccacgcagatcaccggtgcgaccgccgaccctgtcaaggactacctgaagcagatcgga
aaggtcgccctgctgaacgcggccgaagaggtcgagctcgcgatgcgcatcgaggccggc
ctgttcgccgaggagaagctctccacgatgacggccgccgagaaggccagccagctcggg
ctcgacctgcagtgggtcgcccgcgacggtcagcgcgcgaagagccacctgctcggcgcg
aacctccgtctcgtcgtctcgctcgccaagcgctacaccggccgcggcatgcagttcctg
gacctgatccaggagggcaacctcggtctgatccgcgccgtcgagaaattcgactacacc
aagggcttcaagttctcgacgtacgccacctggtggatccgtcaggcgatcacccgcgcg
atggcagaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaag
ctcgcccgagtgcagcgccagatgctgcaggacctgggccgtgagcccacgcccgaagag
ctcagccgcgagctggacatgacacccgagaaggtcgtcgaggtgcagaagtacggccgc
gagccgatctccctgcacacgcctctcggtgaggacggcgacagcgagttcggtgacctc
atcgaggacaccgaggcagtggtccccgcggatgccgtgggcttcacgatgctgcagcgt
cagctggagcagctgctcgactcgctctccgagcgtgaggccggtgtcatccggatgcgc
ttcggactcggcgacggacagcccaagaccctcgaccagatcggtgacacgttcggcgtg
acgcgtgagcgcatccgtcagatcgagtcgaagacgatggcgaagctccgccacccgagc
cgctcgcagtcgctgcgggactacctcgagtga
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