Microbacterium sp. CGR1: AKG07_06080
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Entry
AKG07_06080 CDS
T04046
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mim
Microbacterium sp. CGR1
Pathway
mim03030
DNA replication
mim03430
Mismatch repair
mim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKG07_06080
03430 Mismatch repair
AKG07_06080
03440 Homologous recombination
AKG07_06080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mim03032
]
AKG07_06080
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_06080
Enzymes [BR:
mim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKG07_06080
DNA replication proteins [BR:
mim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKG07_06080
DNA repair and recombination proteins [BR:
mim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKG07_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AKV85935
LinkDB
All DBs
Position
complement(1258116..1261634)
Genome browser
AA seq
1172 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAAKIAAMTQAAADYDMPAIAVTDHGNTFAAFEFYKAANAA
GVKPIIGLEAYVTPGTHRSDKTRVQWGSPDQKSDDVSGSGAYTHMTMWSESTQGMHNLFR
LSSLSSMEGYYFKPRMDRELLQTYGKGLIATTGCPSGEIQTRLRLGQYDAARAAAAEFQD
LFGKENYFAEIMDHGLSIERRVMTDLIRLAKDLNIPLVGTNDSHYTHQHEADAHEALLCV
QSGSTLDDPNRFKFDGDGYYIKTAAEMRQLFRDHPEACDNTLLIAERCEVEFNTAANYMP
RFPVPDGETEDSWLIKEVEAGLHYRYPSGIPDKVRKQAEYETGIILQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMVAYAMKITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIDYVTRKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPPV
MGKDMPLDGMFDSAHPRYKEASEFRALIETDPEAKTVFDRALGLEGLKRQWGVHAAGVIM
SSEPLLDIIPIMRREQDGQIVTQFDYPSCESLGLIKMDFLGLRNLTIISDALDNIRTNRG
EELDLEHLALDDRGAYELLGRGESLGVFQLDGGPMRSLMRLMRPDNFGDISALIALYRPG
PMGANSHTNYALRKNGQQPITPIHPEFTESLADILDESYGLIIYQEQVMAIAQRVAGFSL
GQADILRRAMGKKKKSELDKQFEGFQAGMHANGYSDGAVNAIWEILLPFSDYAFNKAHSA
AYGVVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVSESIKY
FAAVGDDIRFGLGAVRNVGSNVVEGIIAARKDERFSSFHHFLEKVPLHVSNKRTVESLIK
AGAFDSMGDSRRALLEVHEDAVEAAVDRKRNEAQGAIGFDFDSLYDGMEEAPPAKVPARP
EWIKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASISIHNLINSEDMQDGEQVTVAGLV
TSVQHRVAKASGNPYGMITVEDFNGEVTVMFMGKTYTEFQHILQQDSILAVRGRVSKRDD
GLNLHAQSAFAPDVGSFDAAGPLSLVLAEQRATERVMHELADVLRRHNGDTEVVLRVHRG
GTAKVFDVPMPVKVSADLFGDLKSLLGPTCLG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgactccttcgtccacctgcacgtgcacagcgagtactcgatgctcgacggg
gcggcgaagatcgcggcgatgacgcaggcggcggcagattacgacatgccggccatcgcc
gtgaccgatcacggcaacaccttcgcggcgttcgagttctacaaggcggcgaacgccgcg
ggcgtcaagccgatcatcggtctcgaggcctatgtgactcccggcacgcatcgcagcgac
aagacgcgtgtgcaatggggctccccggatcagaagagcgacgatgtctccggctccggt
gcctacacccacatgacgatgtggagcgagagcacgcaggggatgcacaacctgttccgt
ctcagctcgctgtcgagcatggagggctactacttcaagccccgcatggaccgggagctc
ctgcagacatacggcaagggcctgatcgccaccacaggatgcccctcgggtgagatccag
acgcgactgcgcctcggccagtacgacgccgcacgtgcggcggccgccgagttccaggac
ctgttcggcaaggagaactacttcgccgagatcatggatcacggtctctccatcgagcgc
agggtcatgaccgatctgatccggctcgccaaggatctgaacatcccgctcgtcggcacc
aacgactcgcactacacgcaccagcatgaggccgatgcccatgaggcgctgctgtgcgtg
cagtccggttcgacgctcgacgatcccaaccggttcaagttcgacggcgacgggtactac
atcaagaccgccgcagagatgcgtcagctgttccgcgaccaccccgaggcctgcgacaac
acgctgctcatcgccgagcggtgcgaggtcgaattcaacaccgcggccaactacatgccg
cgcttccccgtgccggacggcgagacggaggacagctggctcatcaaggaggtcgaagcg
ggcctccactaccgatacccgagcggcatccccgacaaggtgcgcaagcaggccgagtac
gagaccggaatcatcctgcagatggggttccccggctacttcctcgtcgtcgccgacttc
atcaactgggcgaaggacaacggaatccgcgtcggtccgggccgtggctcgggcgccggg
tcgatggtcgcctatgccatgaagatcaccgacctcgacccgctcgagcacggtctcatc
ttcgagcgcttcctcaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgat
gaccgtcgccgcggcgaggtcatcgactacgtgacgaggaagtacggctccgagcgcgtc
gctcagatcgtcacctacggcacgatcaagtcgaagcaggctctgaaggatgcggggcgt
gtgctgggattcccgttcagcatgggcgagcggctgacgaaggcgatgccgccgcccgtc
atgggcaaggacatgcctctcgacggcatgttcgactcggcgcacccccgctacaaggag
gcgagcgagttccgtgcgctcatcgagaccgatcccgaggcgaagacggtcttcgaccgc
gccctcggtctcgaaggtctgaagcgccagtggggcgtgcacgccgccggtgtgatcatg
tcgtccgagcccctgctcgacatcatcccaatcatgcgccgcgagcaggacggccagatc
gtcacccagttcgactacccgtcctgcgagtcgctcgggctgatcaagatggacttcctg
gggctccgcaacctcacgatcatctcggacgctctcgacaacatccgcaccaaccgcggg
gaggagctcgacctcgaacacctcgccctggatgaccgcggcgcctacgagctgctcggt
cgcggcgaatcgctcggcgtcttccagctcgacggcgggccgatgcgatcgctgatgcgc
ctgatgcgtccggacaacttcggcgacatctccgcgctcatcgcgctgtaccgcccgggt
ccgatgggtgcgaactcgcacacgaattatgcgctgcgcaagaacggccagcagccgatc
acaccgatccacccggagttcaccgaatcgctcgccgacatcctcgacgagtcctacggc
ctgatcatctaccaggagcaggtgatggccatcgcccagcgcgtggccgggttctcgctc
ggccaggccgacatcctgcgccgagcgatgggcaagaagaagaagtccgagctcgacaag
cagttcgagggcttccaagccggcatgcacgcgaacgggtactccgacggtgccgtcaac
gcgatctgggagatcctcctcccgttctcggactacgccttcaacaaagcgcactcggcg
gcatatggggtcgtctcgtactggacggcctacctcaaggcgcactatcccgccgagtac
atggccgcgctgctcaccagcgtcggcgactcgaaagacaagatggcgctctatctcaac
gagtgccgtcgaatgggcatcaaggtgctgccgcccgatgtctcagagtcgatcaagtat
ttcgccgctgtcggcgacgacatccgattcgggctcggtgccgtccgcaacgtcggcagc
aacgtggtcgagggcatcatcgcggcccgcaaggatgagcgattctcctcgttccatcac
ttcctcgagaaggtcccgctgcacgtctcgaacaagcgcacggtcgaatctctgatcaag
gccggcgcgttcgactcgatgggcgactcgcgccgtgcgctgctcgaagtccacgaggat
gccgtcgaggcggctgtggatcgcaagcggaacgaagcacagggtgcgatcggcttcgac
ttcgacagtctgtacgacggaatggaagaggcgccgcctgccaaggtgcccgcccgcccc
gaatggatcaagaaggacaagctcgccttcgagcgcgagatgctcgggctctacgtgtcg
gaccaccccctggccgggctcgaggtgcctctggcgaagcacgcgtcgatctcgatccac
aacctcatcaactcggaggacatgcaggacggtgagcaggtcaccgtcgccggtctcgtc
acgagcgtgcagcatcgcgtcgcgaaggccagtggcaatccgtacggaatgatcaccgtc
gaggacttcaacggcgaggtgacggtcatgttcatgggcaagacgtacaccgagttccag
cacatcctgcagcaggactcgatcctcgccgtgcgcggccgggtgtcgaagcgtgatgac
ggactcaacctgcatgcgcagtcggcgttcgcgccggatgtcggttccttcgacgccgcg
ggtccgctctcgctcgtgctcgccgagcagagggcgacggagcgggtgatgcacgagctc
gccgacgtgctgcgccgtcacaacggggacaccgaggtcgtgctgcgggtgcaccgcggc
ggcacggcgaaggtcttcgacgtgccgatgccggtcaaggtctcggccgatctgttcgga
gatctcaaatcgctgctcgggccgacctgcctgggctga
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