Microbacterium sp. CGR1: AKG07_17185
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Entry
AKG07_17185 CDS
T04046
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mim
Microbacterium sp. CGR1
Pathway
mim03420
Nucleotide excision repair
mim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKG07_17185
03430 Mismatch repair
AKG07_17185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_17185
Enzymes [BR:
mim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKG07_17185
DNA repair and recombination proteins [BR:
mim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKG07_17185
MMR (mismatch excision repair)
Other MMR factors
AKG07_17185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_16
EcoR124_C
FWWh
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKV87757
LinkDB
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Position
3584342..3586804
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AA seq
820 aa
AA seq
DB search
MTEAPLIVPGSVGPRSTGAQGQDDLLAGLNPQQLEAVTYRGPALLIVAGAGSGKTSVLTR
RIASLLRSREAWPSQILAITFTNKAAGEMRERVEAIVGDAARGMWISTFHSACVRILRRE
AQQFGFTKSFTIYDSGDSRALIKRLVKQHEADAYGLTPGAVQSRISKLKNELSDADAYAR
QANMNDPAERIFVELFADYQRQLQKANAFDFDDLIGQTVYLFRAFPQVADTYRRRFRHVL
VDEYQDTNHAQYALIHELTRPVSGDSPDPYASDGMMIFEPETTPELEGASLTVVGDSDQS
IYAFRGADIRNISEFERDFPGARVVLLEQNYRSTQNILSAANAVIGNNFDRKDKKLWSDK
GDGDMIVGFTGYSQHDEAQFVADEVEALHRAGMPYSEMAVFYRTNSQSRALEEIFIRSAV
PYKIMGGTKFYERAEIKDALAYLVAVANPADEMAVRRILNKPRRGIGDVTETAIARFAED
HDITFRQALSVPEQLGFGPKIQAGIAQLDAVLAEATEIMLPASGEVPAPTTVADGLSVLL
SKSGYLDALRASRDPQDEARVENLDEFVAVARDFARNNPDGTIVDFLTEVALVSDADDLD
DESGSVSMMTMHTAKGLEYDAVFVTGVEEDLIPHRISAGEPGGPQEERRLFYVGITRARK
RLHLSLAMTRAQFGEVSVAMPSRFLQEIPAGLIDWRQSPGDVNSRGGMQSRALNARRAGG
FGGSGGSGSGDRFAVKQLPGRDSLKPLSTAMDKFPNRVTAKMRDNGDLELAAGDRIRHTD
FGDGRVDAVTGEGAKRIAHVRFDSAGQKKLLIKVAPIEKI
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcccccctcatcgtccccggatccgtcggccctcgctccaccggagcgcag
ggacaggacgacctcctcgccggcctcaacccgcagcagctcgaagcggtgacctaccgc
ggacccgcgctgctgatcgtcgcgggtgcaggctccggcaagaccagcgtgctgacacgg
cgcatcgcctctctgctgaggtcacgcgaggcatggcccagccagatcctcgcgatcacc
ttcaccaacaaggccgccggtgagatgcgcgagcgcgtcgaggcgatcgtgggcgacgcg
gcgcggggcatgtggatctcgacgttccactccgcctgcgtgcggatcctccggcgtgag
gctcagcagttcgggttcaccaagtcattcacgatctacgactccggtgattcgcgggcg
ctcatcaagcggctggtcaagcagcacgaggccgatgcctacggtctcacgcccggggcc
gtgcagtcgcgcatctccaagctcaagaacgagctgtcggatgccgacgcgtatgcgcga
caggcgaacatgaacgacccggccgagcggatcttcgtcgagcttttcgccgactaccag
cggcagctgcagaaggcgaacgcgttcgacttcgacgacctgatcggccagaccgtctat
ctgttccgcgccttcccgcaggtcgccgacacctatcggcgcaggttccgtcatgtgctg
gtcgacgagtaccaggacacgaaccacgctcagtacgccctcatccacgagctgacgcgt
ccggtctcgggcgattcgcccgacccgtatgcctccgacggcatgatgatcttcgagccg
gagaccacaccggagctcgaaggcgcgtcactcaccgtggtgggtgattccgaccagtcg
atctacgcgttccgcggcgccgacatccgcaacatcagcgagttcgagcgcgacttcccc
ggcgctcgcgtcgtgctgctcgagcagaactatcgctcgacgcagaacatcctctcggcg
gcgaacgcggtgatcggcaacaacttcgaccgcaaggacaagaagctctggagcgacaag
ggcgacggcgacatgatcgtcggcttcaccgggtactcccagcacgatgaggcccaattc
gtcgccgacgaggtcgaggcgctgcatcgcgccggcatgccgtattccgagatggccgtc
ttctatcgcacgaactcgcaatcgcgtgcgctggaggagatcttcatccgctccgccgtg
ccctacaagatcatgggcggcacgaagttctacgagcgtgccgagatcaaggacgccctc
gcctacctggtcgccgtcgcgaacccggccgacgagatggctgtccgccgcatcctgaac
aagcccaggcgcggcatcggcgatgtgaccgagacggcgatcgcccggttcgccgaagac
cacgacatcacgttccggcaggccctgtccgtgcccgagcagctgggcttcggtccgaag
atccaggccggcatcgcccagctcgatgccgtgctggccgaggcgacggagatcatgctc
cccgcctccggcgaggttcccgctccgaccaccgtcgccgacgggctcagcgtgctgctg
tcgaagagcggctacctcgacgccctgcgggcgagccgcgacccacaggatgaggcgcgc
gtcgagaacctcgacgagttcgtcgccgtcgcgcgggacttcgcgcgcaacaatcctgac
gggacgatcgtggacttcctcacggaggtcgccctggtctcggatgccgatgacctcgat
gacgaatcagggtcggtgtcgatgatgacgatgcacaccgcgaaggggctcgagtacgac
gcggtcttcgtgaccggcgtcgaagaggatctgatcccgcaccgcatctcggcgggggag
ccgggcggtcctcaggaggagcggaggctcttctacgtcggcatcacgcgcgcgcggaag
cgcctgcacctgtcgctcgcgatgaccagggcccagttcggcgaggtctcggtcgcgatg
cccagccgcttcctgcaggagatccccgccggactcatcgactggcgccagtcgcccggc
gacgtcaactcccggggaggcatgcagtcccgtgcgctcaatgcgcgccgggcaggcgga
ttcggcggctccggcggctccggttccggcgaccgtttcgcggtgaagcagctgccgggg
cgcgactctctcaagccgctctcgaccgcgatggacaagttccccaaccgcgtgacggcg
aagatgcgtgacaacggcgacctcgaactcgccgccggggatcgcatccgccacacggac
ttcggcgacggacgggtcgacgcggtgacgggcgagggtgccaagcgcatcgcgcacgtg
cgcttcgattccgccggccagaagaagctcctgatcaaggtcgcgccgatcgagaagatc
tag
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