Microbacterium sp. CGR1: AKG07_17285
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Entry
AKG07_17285 CDS
T04046
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mim
Microbacterium sp. CGR1
Pathway
mim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AKG07_17285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mim03000
]
AKG07_17285
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_17285
Enzymes [BR:
mim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AKG07_17285
Transcription factors [BR:
mim03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AKG07_17285
DNA repair and recombination proteins [BR:
mim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AKG07_17285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
DUF6918
Motif
Other DBs
NCBI-ProteinID:
AKV87777
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Position
3605183..3606682
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AA seq
499 aa
AA seq
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MSFPVTDFDERYRAISARDTRFDGQFVTAVRSTGIYCRPSCPARTPKPQNVTFYPTSAAA
HEAGFRACKRCLPEAAPGSPAWDLRSDVAARAMRLIASGVVEREGVSGLAVRLGYSTRHL
TRLLSTELGAGPLALARAHRAHTARMLLVGTDMQISDVAFSAGFASIRQCNDTIREVFTL
TPGELRARRKPPASAAPGAIDLVLPYRGPLDASGIFQWMAARAVSGVEEAATTSFSRHLR
MAGGPAWFEVHQDSTQRLHLRARVAQLGDLAPLVSTVRRIFDLDADPLAVDEALSAHPEI
APLVARTPGIRVPGSADPHEMLIRAMVGQQITVVAARTALTALADALGERTEQGLLFPTM
AAIAEHGASVLRGPAARIRAIVGAATALADGSLALTVGDDGVEQRAALLAMPGIGPWTAD
YVRMRVLGDPDVLLPGDVALRAGAAASGLPADPLPLVAWAERAAPWRSYLSAHLWRAAPA
RPVRRPSARQTTALVKETS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccccgtgaccgacttcgatgagcgataccgtgcgatcagcgcgcgcgacacc
cgcttcgacgggcagttcgtgaccgccgtgcgctctaccgggatctactgccgtccgagt
tgccccgcgcgcacgcccaagccgcagaacgtcaccttctatcccaccagcgcagcggcg
cacgaggcgggcttccgggcgtgcaagcgctgtctgcccgaagctgccccgggctcgcct
gcgtgggacctgcgcagtgacgtcgcggcgcgggcgatgcgtctcatcgcctcgggcgtc
gtcgagcgcgagggagtgtcgggcctcgccgtgcgtctcggctattcgacacggcacctg
acccgactgctctcgaccgagctgggggcaggtccgctcgccctcgcgcgggcgcatcgc
gcgcacacggcgcgcatgctgctggtgggcacggacatgcagatctcggatgtggctttc
tcggccggtttcgcgagcattcggcagtgcaacgacacgatccgcgaggtgttcactctg
actccgggcgagctcagggctcgacggaagcccccggcgtccgctgctcccggtgcgatc
gacctcgtcctcccgtaccgcgggccgctcgatgcgtccggaatcttccagtggatggct
gcgcgtgcggtatcgggggtcgaagaggccgcgaccacatctttctctcggcacctgcgt
atggcgggcgggcccgcgtggttcgaagtgcatcaggactcgacgcagcgactgcacctt
cgggcgcgcgtcgctcagctcggcgacctcgctccgctggtgtcgaccgtgcgacggatc
ttcgacctcgacgccgaccctctcgcggtcgacgaggcgctgagcgcccaccccgagatc
gctccgctggtcgcgcgcactccgggcatccgcgtgccgggctcggcggatccgcacgag
atgctgatccgtgccatggtcggtcagcagatcaccgtcgtcgccgcgcgcactgccctc
accgcgctcgccgacgcgctgggggagcgcacggagcaggggctgctcttcccgacgatg
gcggcgatcgccgagcacggggcctcggtgctgcgcggaccggccgcccgcatcagggcg
atcgtcggcgcagccacggccctcgccgacggcagcctcgctctcacggtcggcgacgac
ggagtcgagcagcgcgctgccctgctcgcgatgcccggcatcggcccctggacggccgac
tatgtccggatgcgggtgctgggcgaccccgacgtgctgctccccggcgacgtcgcactt
cgtgcgggggccgccgcgtccggactgccggcggatccgctgccgctggtcgcgtgggcc
gagcgggctgccccgtggcgcagttatctcagtgctcacctctggcgagcagcgcccgca
cgtccggttcgacggccgagcgcgagacagaccaccgcccttgtgaaggagacctcatga
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