Microbacterium sp. M28: OED01_04865
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Entry
OED01_04865 CDS
T11496
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mimz Microbacterium sp. M28
Pathway
mimz03030
DNA replication
mimz03430
Mismatch repair
mimz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mimz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OED01_04865
03430 Mismatch repair
OED01_04865
03440 Homologous recombination
OED01_04865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mimz03032
]
OED01_04865
03400 DNA repair and recombination proteins [BR:
mimz03400
]
OED01_04865
Enzymes [BR:
mimz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OED01_04865
DNA replication proteins [BR:
mimz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OED01_04865
DNA repair and recombination proteins [BR:
mimz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OED01_04865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UYO98047
LinkDB
All DBs
Position
complement(975737..976330)
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AA seq
197 aa
AA seq
DB search
MPLDFTAIDFETANSSPASACSVGLVRVRGGEVVAMTGWLIRPPAGHDDFQEWNIRIHGI
HPSDVADAATWPEQFDRLCDFAGADVLVAHNAGFDLNVLRRASAATGLECPPYRSLCSLQ
VARKTYQLDSYRLPKAAAAAGFAEFSHHDALADARACAQIVIDAARRHGATDVDALADAL
SLRVTTPPVAAPERAVA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtgccactggatttcactgcgatcgacttcgagaccgcgaactccagccccgcctccgcg
tgttccgtcggactcgtgcgcgtgcgcggcggcgaggtcgtcgcgatgaccggatggctg
atccgcccgccggccgggcacgacgatttccaggagtggaacatccgcatccacgggatc
cacccgagcgatgtcgcggacgccgccacctggccggagcagttcgatcggctgtgtgat
ttcgccggagcagacgtgctcgtggcgcacaatgccgggttcgatctgaacgtgctgcgc
cgcgcctccgccgccaccgggctcgagtgcccgccgtaccgctcgctgtgcagcctgcag
gtggccaggaagacctaccagctcgactcgtaccgcctgcccaaagcggccgcggccgcc
ggtttcgccgagttctcgcaccacgacgcgctggcggatgcgcgtgcctgcgcgcagatc
gtgatcgacgccgcgcgacggcacggcgccaccgatgtggatgcgctggccgacgcgctg
agcctgcgcgtgacgacgccgccggtggcggcccccgagcgcgccgtcgcctga
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