Microbacterium sp. M28: OED01_07240
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Entry
OED01_07240 CDS
T11496
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mimz Microbacterium sp. M28
Pathway
mimz00061
Fatty acid biosynthesis
mimz00071
Fatty acid degradation
mimz01100
Metabolic pathways
mimz01212
Fatty acid metabolism
mimz02024
Quorum sensing
mimz04146
Peroxisome
Module
mimz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mimz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OED01_07240
00071 Fatty acid degradation
OED01_07240
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OED01_07240
09145 Cellular community - prokaryotes
02024 Quorum sensing
OED01_07240
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mimz01004
]
OED01_07240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mimz04147
]
OED01_07240
Enzymes [BR:
mimz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OED01_07240
Lipid biosynthesis proteins [BR:
mimz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OED01_07240
Exosome [BR:
mimz04147
]
Exosomal proteins
Exosomal proteins of breast milk
OED01_07240
Exosomal proteins of breast cancer cells
OED01_07240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
4HPAD_g_N
Motif
Other DBs
NCBI-ProteinID:
UYO98496
LinkDB
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Position
complement(1463601..1465301)
Genome browser
AA seq
566 aa
AA seq
DB search
MTTFDPPRPWVASYAAGVPEDLAPVQGSLIDIVAASARDYPDAPALQFFGRETTYAELQQ
AIDRAAAGLRDLGVKAGDPVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTPRELRKQF
EDHGAKHAIVWNKVVGTVQEFPADLAVSTLISVDVTKGMPRLTQLALKLPIAKARESRAA
LTEKVRGTVVWERVVGADPLPVSHPKPQTDDLAIIQYTSGTTGTPKGAALTHRNLLANAA
QSQAWVPSIQRGNGCVVYAVLPMFHAYGLTLCLTFAMSMGARLVLFPKFDPDLVLDVVKK
HPATFLPLVPPIADRLLSAAKAKGVSLEGIEVAISGAMALPHELVVPFEKATGGYLVEGY
GLSECSPVLMANPVADHRVPGTVGLPLPGTECRVVDPDEPTKDVEPGSAGELVVRGPQVF
SGYYGKPEATEEVFVDGWYRTGDIVTIDEAGFVRIVDRIKELIITGGFNVAPTEVENALR
QHPLVSDAAVVGLPSDHSGEEVVAAIVVDDADDVDVEAIREFARGILTPYKVPRRVFVVD
ELPKSLIGKVLRRQVKERLLALTNGS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgttcgatcctcctcgtccctgggtcgccagctatgccgccggcgtccccgaa
gacctcgcaccggtgcagggctccctcatcgacatcgtcgcggcctcggcacgcgactac
cccgacgctcccgcgctgcagttcttcgggcgggagaccacatacgccgagctccagcag
gcgatcgatcgcgctgctgccggactgcgggatctcggagtgaaggccggggatccggtc
gccatcgtgctgccgaactgtccgcagcacatcgtcgccttctacgccgtcctgcgcctc
ggtgccgtcgtcgtcgagcacaacccgctctacacgccgcgcgagctgcgcaagcagttc
gaggaccacggtgcgaagcacgccatcgtctggaacaaggtcgtcggaacggtccaggag
ttccccgccgacctcgccgtgtcgaccctcatctcggtcgacgtcacgaaggggatgccg
cggctcacgcagctcgccctgaagctgccgatcgccaaggcccgcgaatcccgcgcggcg
ctgaccgagaaggtgcgcggcaccgtcgtgtgggagcgggtcgtaggcgctgacccactg
cccgtctcgcatccgaagccgcagaccgatgacctggcgatcatccagtacacgtcgggc
accaccggcactccgaagggcgctgcgctcacgcatcgcaatctgctcgccaacgccgcg
cagtcgcaggcctgggtgccgtcgatccagcgcggcaacgggtgcgtcgtgtacgccgtg
ctgccgatgttccacgcgtacggtctcacgctgtgcctcacgttcgcgatgtcgatgggc
gcgcgcctcgtgctgttcccgaagttcgatcccgacctcgtgctggatgtcgtgaagaag
cacccggcgacgttcctgccgctcgtgccgccgatcgcggaccgtctgctcagcgccgcg
aaggcgaagggcgtgtcgctggagggcatcgaggtcgcgatctcgggtgcgatggcgctg
ccgcatgaactcgtcgtccccttcgagaaggccaccggcggctacctcgtcgagggctat
ggtctgagcgagtgctcgccggtgctcatggcgaacccggtggccgaccaccgcgttccc
gggacggtcggactgccgctgcccggcacggaatgccgcgtggtggaccccgatgagccg
acgaaggacgtcgaaccggggtcggcgggagagctcgtcgtccgcggcccgcaggtgttc
tccggttactacggcaagccggaggccaccgaagaggtgttcgtggacggctggtaccgc
acgggcgacatcgtcacgatcgacgaggccggcttcgtccgcatcgtcgaccgcatcaag
gagctcatcatcaccggcgggttcaacgtcgccccgaccgaggtcgagaacgcgctgcgg
cagcatccgctggtgtcggatgccgcggtcgtcgggcttcccagcgatcactccggcgag
gaggtcgtggccgccatcgtggtggatgacgcggacgacgtcgacgtcgaggcgatccgc
gagttcgcccgcggcatcctgaccccgtacaaggtcccgcgccgggtcttcgtggtcgac
gagctgcccaagtcgctgatcggaaaagtcctgcgccgccaggtcaaggagcgcctcctc
gccctcacgaacggctcctga
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