Microbacterium sp. M28: OED01_07635
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Entry
OED01_07635 CDS
T11496
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mimz Microbacterium sp. M28
Brite
KEGG Orthology (KO) [BR:
mimz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mimz03032
]
OED01_07635
03400 DNA repair and recombination proteins [BR:
mimz03400
]
OED01_07635
Enzymes [BR:
mimz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OED01_07635
DNA replication proteins [BR:
mimz03032
]
Prokaryotic type
DNA Topoisomerases
OED01_07635
DNA repair and recombination proteins [BR:
mimz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OED01_07635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UYO98567
LinkDB
All DBs
Position
complement(1541656..1544100)
Genome browser
AA seq
814 aa
AA seq
DB search
MPKSSSAEPVEERIQDIDLESEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILFQMAE
MGLRPDRGHVKSARVVGEVMGKLHPHGDSAIYDALVRLAQEWALRLPLVDGHGNFGSLDD
GPAAARYTEARLAGAALALTNDLDEDVVDFVPNYDGQFQQPGVLPAAFPNLLVNGASGIA
VGMATNMAPHNLIEVVAAATYLLENPDATTEELMEFVPGPDFPSGGIVMGLDGIKDAYTN
GRGALKVRGKVSIESLGPRRTGIVVTELPYMVGPERLIEKIRDAVQSKKLQGISDVTDLT
DRHHGLRVAITVKTGFDPNAILEQLYRLTPLEDSFSINNVALVQGQPRTLGLKELLSVYV
GHRIEVITRRSRYRLARREERLHLVEGLLIAILDIDEVIQVIRSSDDSEQARTRLRTVFD
LSEPQAEYILELRLRRLTKFSRIELETERDALKAEIAALQELLGSDALLRAQVAAELDAA
ADAYGTPRRTLLMNAKPAAPRRAKAGETDLQIADAPTLIALSTTGRAVRVDVVGDQEISR
PARRSKHDAIASTVEATVRGEVGALTSTGRLLRFSPVDLPSVPASSVQLGAGTPLRDYLG
ITARTERVIALVPLDTETPFAIGTAQGTVKRIVPSTLPVRPELEVIGLKPGDTVVGGASA
ADDTELVFVTTDAQLLHFTASAVRPQGAPAGGMAGIKLGAGATVLHFGVVTTDEEAVVAT
VSGAEDMIPGTDPGRAKVSFFSEYPAKGRATGGVRAHAFLKGEDRLTVAWVGDEPAYAVG
VDGAVRTLPVPGAKRDASGQPVDGVIGSIGRPVV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaatcctcgtccgctgaacccgtcgaggaacgcatccaggacatcgacctcgag
agcgagatgcaggggtcgttcctggagtacgcgtactccgtgatctactcgcgcgccctc
cctgatgcgcgcgacggcctcaagcccgtgcagcggcgcatcctgttccagatggccgag
atgggcctgcgtcccgaccgcgggcacgtcaagagcgcgcgcgtcgtcggtgaggtgatg
ggaaagctgcacccgcacggcgactcggccatctatgacgccctggtgcgcctcgcacag
gagtgggccctccggcttcccctcgtcgacggccatggcaacttcggctcgctcgatgac
ggaccggccgcggcgcgttacaccgaggcaaggctcgccggcgcggcgctcgccctgacg
aacgatctcgacgaggacgtcgtcgacttcgtcccgaattacgacggccagttccagcag
cccggcgtgctccctgcggcgtttcccaacctcctggtcaacggcgccagcggcatcgcg
gtcggcatggcgaccaacatggccccgcacaacctcatcgaggtcgtcgcggccgccacg
tatctcctcgagaacccggacgccacgaccgaagagctcatggagttcgtcccaggtccc
gacttcccctccggcggcatcgtcatgggtctggacggcatcaaggatgcctacacgaac
ggccggggcgcgctcaaggtccgcggcaaggtctcgatcgaatccctcggcccacggcgc
accggcatcgtcgtcaccgagctgccctacatggtcggccctgagcgcctgatcgagaag
atcagggacgccgtccagtcgaagaagctgcagggcatcagcgacgtcaccgatctcacc
gatcgccatcacggcctgcgtgtcgcgatcacggtcaagaccggcttcgacccgaacgcg
atcctcgagcagctctaccggctcacgccgctggaggactccttcagcatcaacaacgtc
gccctcgtccagggccagccgcgcacgctcggcctcaaggagctgctgagcgtctacgtc
ggccaccgcatcgaggtcatcacccgccgcagccgctaccggctcgcgcgccgcgaggag
cgcctgcacctcgtcgagggtctgctcatcgcgatcctcgacatcgacgaggtcatccag
gtcatccgctcctcggacgacagcgagcaggccaggacccgactgcgcacggtcttcgac
ctgtccgagccgcaggccgagtacatcctcgaactgcgcctgcgccgcctgacgaagttc
tcgcgcatcgagctcgagaccgagcgcgacgcgctcaaggcggagatcgcggcgctccag
gagcttctcggcagtgacgcgcttctgcgcgctcaggtcgccgcagagctggatgccgcg
gcggacgcctacgggacccctcgccgcacgctgctgatgaacgccaagcctgcggctccg
cgtcgcgcgaaggccggtgagaccgatcttcagatcgccgacgcgcccacgctgatcgct
ctgtcgacgacgggtcgcgccgtgcgcgtcgacgtcgtcggcgaccaggagatcagccgg
cccgcgcggcggagcaagcacgatgcgatcgcgtcgacggtcgaggcgacggtccgaggc
gaggtcggcgctctgacgtcgaccgggcgcctgctgcgcttctcccccgtcgacctgccc
tcggtccccgccagctcggtgcagctgggggccggcacgccgctgcgggactacctcggc
atcaccgcgcgcaccgagcgagtgatcgcgctcgtgccgctcgacaccgagacgcccttc
gcgatcggcacggcgcagggaaccgtcaagcgcatcgtcccgtcgacgcttcccgtgcgc
cctgaactcgaggtgatcgggctcaagccgggcgacaccgtggtcggcggcgcctcggcc
gccgacgacacggagctcgtcttcgtcacgacggacgcgcagctgctgcacttcaccgcg
tccgcggtgcgtccgcagggggcacccgcgggaggcatggcgggcatcaagctcggtgcg
ggggccacggtgctgcacttcggcgtggtcacgaccgatgaggaagccgtcgtcgcgacg
gtgtccggcgccgaggacatgatccccggcaccgaccccggccgcgcgaaggtgtcgttc
ttctccgagtacccggccaagggacgcgccaccggcggtgtgcgcgcgcacgccttcctg
aagggcgaggaccggctgaccgtcgcctgggtcggcgatgagcctgcgtatgcggtcggc
gtggacggcgcggtacggacgcttcccgtccccggcgccaagcgggatgcctcagggcag
ccggtcgacggcgtcatcggatccatcggacgccccgtcgtctga
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