Microbacterium sp. M28: OED01_08005
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Entry
OED01_08005 CDS
T11496
Name
(GenBank) DEAD/DEAH box helicase
Organism
mimz Microbacterium sp. M28
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UYO98632
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All DBs
Position
1616011..1619259
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AA seq
1082 aa
AA seq
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MTAPFVPEQDILAHTDPGSFERGFGYARDGKVLYAIWNTDRRRINGQVSGAGGRPYSCAI
EFADDDSIMTSRCACPVRSKCKHVVAVLLASNAKLGPRMPSPSASRSRTPAWRSLLPATQ
TEAIPLALGLEVRRRAAQGAHQWAPRPVMTAHPRELAQNRGDEVLLAVRPLMRSESTGNW
IQGDAGWDAIRRSSGRFAPEQVRWFGDLLSIARESLLSGTAGEWILLDLVVSRLLWDHLS
DARANGIAIVPMQKHTDIRFAERAEVSATIGAAEDGLLLAPSVEIDAVPYPADRVRPLGR
SGVYAWDVHGARIQVTLAPVDLTPIAHALLSGPAEIAIPAAERDAFLSEAYPQLVRQAGA
RAAPGVDLPEPSEPQAHVTVVHRSGHVVEYTLRWDYPGFGRYEIEPGGAAVRDPAREAEI
LSAIRDTWEAVLPVAFAPQGTLRDTDAAEFVSTILGRWETIGVVVDNRGTPQAYRELTGD
PLITVSTVETTSTDWFDLGILVTIDGRTIPFEPLFTALAMRRNKLLLVDGSYFSLAHPAL
QRLRDLLDEAAELAEWEAGPKISRHQVALWEEFEDLADEAQPAVSWRATVEGLRDAESVP
PTDVPDGLSAQLRPYQKTGFDWLAFLWRHRLGGILADDMGLGKTLQLLTLILHVREAGEH
RPILVVAPTSVLGTWQDEAAHFAPDLDVRIIDGTSAKRGESVADAAADADLIVTSYTVAR
LDEGAFSAVEWAMLILDEAQFVKNPATLQHRAIASLRADVTFVVTGTPMENSLRELWALL
RLAAPGLFPSARKFRQEYIQPIEQGKVPENEEGAPYRQRRLERLRRRIRPLMLRRTKDLV
AADLPPKQEQLLHVELTPAHRTLYDTVLQRERQKVLGLLQDLDRNRFIVFRSLTMLRMLS
LAPALIDGEDARIGSAKLEVLLERVQELQAEGHRALVFSQFTSFLSLAAERLDEAGVPYA
YLDGATRNRRGVIDGFRSGEQPVFLISLKAGGFGLTLTEADYVFLLDPWWNPAAEAQAVD
RTHRIGQTEQVFVYRMIATGTIEEKVLALQQRKARLFTAVMDDEQLFAQTLTADDIRGLF
EG
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccgttcgtccccgagcaggacatcctcgcgcacaccgacccaggcagcttc
gaacgcggtttcggctacgcccgcgacggcaaggtgctgtacgcgatctggaacaccgac
cgtcggcgcatcaacggccaggtctcaggggcgggcgggcggccgtacagctgtgcgatc
gagttcgccgacgacgattcgatcatgaccagccgttgcgcgtgtcctgtgcgatcgaag
tgcaagcatgtcgtcgcggtgctgctcgcgagcaacgccaaactcggcccccggatgccg
tcgccgtcggcgtcgcgctcccggactcccgcgtggcggtcgctgctgccggcgacgcag
acggaggcgatcccgctcgccctcggcctggaagtgcgccgccgagcggcccagggcgcg
caccagtgggcaccacggcccgtgatgacggcgcatccgcgcgagctcgcccagaacagg
ggcgatgaggtgctgctcgcggtgcggccgctcatgcgcagcgaatccaccggcaactgg
atccagggcgacgccggctgggacgcgatccggcgatcgtccggtcgattcgcgcccgag
caggtgaggtggttcggagatctgctgagcatcgcgcgtgaatccctgctctccggcacg
gcgggggaatggatcctcctcgacctcgtcgtctcgcgcctgctctgggatcacctgagc
gacgccagggccaacgggatcgcgatcgtgccgatgcagaagcacaccgacatccggttc
gcggaacgcgccgaggtcagtgcgacgatcggcgcggccgaggacgggctgctgctcgca
ccgagcgtcgaaatcgatgccgtcccgtacccggcggacagggtccgcccactcggtcga
tccggcgtgtacgcctgggacgtgcacggtgcccgcatccaggtcaccctcgctcccgtg
gatctcacgccgatcgcgcacgctctgctgtcggggcccgccgagatcgcgattcccgcg
gccgagcgcgacgccttcctgtccgaggcctacccccagctcgtgcgtcaagccggtgcc
cgcgccgcccccggcgtcgatctgcctgagccgtccgagccgcaggcgcacgtcaccgtg
gtccaccgcagcggtcatgtcgtcgagtacacgctgcgctgggactaccccgggttcggc
cggtacgagatcgaacccggcggcgccgccgtgcgggatccggcacgcgaggcggagatc
ctgagtgcgatccgggacacctgggaagcggtcctcccggtcgccttcgcaccgcagggc
acgttgcgggacacggatgccgcggagttcgtgtcgacgatcctcggccgctgggagacc
atcggagtcgtcgtcgacaaccggggaactccgcaggcctaccgcgaactcaccggcgac
ccgctcatcacggtgtcgacggtcgagaccacgtcgaccgactggttcgacctgggcatc
ctcgtcacgatcgacggacggacgatcccgttcgagccgctgttcaccgctctggccatg
cggcgcaacaagctgctgctggtcgacggcagctacttctcgctcgcgcatccggcgctg
caacggctgcgcgatctgctggacgaggcggccgagctcgccgagtgggaggcggggccg
aagatcagccgccaccaggtcgcgctctgggaggagttcgaggacctcgcggacgaggcg
cagccggcggtgagctggcgggcgaccgtcgaggggctgcgcgatgcggagagcgtgcct
cccaccgacgtccccgatggcctgtccgcacagctgcggccgtatcagaagaccggcttc
gactggctcgctttcctgtggcggcaccggctcggcggcatcctcgccgatgacatgggg
ctgggaaagacgctgcagctgctcaccctcatcctgcacgtgcgcgaggcgggggagcac
cgaccgatcctggtcgtcgccccgacctcggtgctcggcacatggcaggacgaggcggcg
cacttcgcccccgacctggacgtgcgcatcatcgacggcacgagcgccaagcgcggcgag
tcggtcgcggatgccgcggcggacgccgacctgatcgtgacgtcgtacacggtcgcccgc
ctcgacgaaggcgcgttcagcgctgtcgagtgggcgatgctgatcctcgacgaggcgcag
ttcgtgaagaacccggcgaccctccagcaccgggcgatcgcctccctgcgcgcggatgtc
acgttcgtcgtgaccggaacgccgatggagaacagcctccgggagctgtgggccctgctg
cgcctggcggcacctgggctgttcccctcggcgcggaagttccgtcaggagtacatccag
cccatcgagcagggcaaggtccccgagaacgaggagggggcgccgtatcgccaacggcgg
ctcgagcgcctgcgccgccgcatccggccgctcatgctccgccggaccaaggatctggtc
gcggccgatctgcccccgaagcaggagcagctgctgcacgtggagctgacgcctgcacat
cgcacgctgtacgacacggtcctccagcgcgagcggcagaaggttctcgggctgctccag
gacctcgaccggaaccgcttcatcgtgttccgctcgctcacgatgctgcggatgctgagc
ctggcaccggcgctcatcgacggcgaggacgcgcggatcgggtccgccaagctcgaggtg
ctgctggagcgcgtgcaggagctgcaggccgaggggcaccgtgccctggtcttcagccag
ttcacgtcattcctgtccctcgccgctgagcgcctcgacgaggcgggcgtgccgtacgcg
tatctggacggggcgacccgcaaccgtcgcggcgtgatcgacgggttccgcagcggcgag
cagcccgtgttcctgatcagcctgaaggccggtggcttcggactgaccctgaccgaggcc
gactacgtgttcctgctggacccgtggtggaacccggcggccgaagcgcaggccgtcgat
cggacgcatcggatcggccagaccgagcaggtgttcgtgtaccggatgatcgcgaccggg
acgatcgaggagaaggtcctcgcgctgcagcagcgcaaggcgcgactgttcacggcggtg
atggacgacgagcagctcttcgcccagacgctcaccgccgacgacatccgcggcctgttc
gagggctga
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