Microbacterium sp. M28: OED01_09915
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Entry
OED01_09915 CDS
T11496
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mimz Microbacterium sp. M28
Pathway
mimz00470
D-Amino acid metabolism
mimz00550
Peptidoglycan biosynthesis
mimz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mimz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OED01_09915 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OED01_09915 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mimz01011
]
OED01_09915 (murD)
Enzymes [BR:
mimz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
OED01_09915 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mimz01011
]
Precursor biosynthesis
Amino acid ligase
OED01_09915 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Oxidored_nitro
Pyr_redox_2
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
UYO95926
LinkDB
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Position
complement(2004052..2005587)
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AA seq
511 aa
AA seq
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MTERRLDELTSWHADWTGLRVAVLGLSVTGFSVADTLTELGAEVLVLSESASEEYERLVP
IIGAALEIGPLSDVPDALRAFGPEVVIASPGFPPSHPVIRWTQEAGIPLWGDVELAWRVR
DKVVRPDGSPAEWVLITGTNGKTTTTQLTATLLVEGGLRAAPCGNIGIPVLDAVRDPAGF
DVLVVELSSHQLWYLGQSAPEAELYPYSTVCLNLADDHLVWHGSARAYRDAKAIVYRNTR
VACVYNKADAATREMVEEADVVDGARAIGFDLGIPGPSDFGIVEGILADRAFLDDRANSA
LELTTIADLERAGLSAPHVVQNILAASALARSLGVEPEAIARALSAFRMDAHRIQVIARH
RGITWVDDSKATNPHAAASSLRAYPGAVWVVGGDLKGVDIAELVADVGSTARAAVVIGVE
RAEVVAAFARHAPAVPVFEVVTGDTGEVMNRVVEIATGIVDGEGTVLLAPAAASFDQFSS
YADRGRRFAEAVQGWIDRGSAHDAGGSPEAH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcggcgcctcgacgagctgaccagctggcacgccgattggaccggcctccgg
gtcgccgtcctcggactctccgtgaccggattctcggtcgccgacaccctcaccgagctc
ggtgccgaggtgctcgtgctgtccgagagcgcgagcgaggagtacgagcggctcgtgccg
atcatcggcgccgcgctcgagatcggcccgctctccgacgtcccggatgcgctgcgcgcg
ttcggaccagaggtcgtcatcgcttcgccggggttcccgccgtcgcaccccgtgatccgc
tggacgcaggaagccggcatcccgctctggggcgatgtggagctcgcctggcgggtgcgc
gacaaggtcgtgcgtccggacggcagccctgccgagtgggtgctcatcaccggcaccaac
ggcaagacgacgacgacgcagttgactgcgaccctgctcgtcgaaggcggcctccgcgcg
gcaccgtgcggcaacatcggcatccccgtcctggacgcggtgcgcgacccggccggcttc
gatgtcctcgtggtcgagctctccagccatcagctctggtacctcggacagagcgcgccg
gaggccgagctctacccgtactcgaccgtctgcctgaacctcgccgacgatcacctcgtc
tggcacggcagcgctcgggcctaccgggacgcgaaagcgatcgtctaccgcaacacgcgg
gtcgcctgcgtgtacaacaaggcggatgccgcgacgcgcgagatggtcgaagaggcggat
gtcgtcgacggcgcccgtgcgatcgggttcgacctcggcatccccggccccagtgacttc
ggcatcgtcgaggggatcctcgccgatcgggcgttcctcgacgatcgcgccaacagcgcc
ctcgaactgacgacgatcgccgacctcgagcgcgcagggctgtccgcaccgcacgtggtg
cagaacatcctcgccgccagtgcactggcacgatcgctcggcgtcgagccggaggcgatc
gcgcgggcgctgagcgccttccggatggatgcccaccgcatccaggtcatcgcgcggcac
cgtgggatcacctgggtcgacgattccaaggccaccaacccgcacgccgcggcgtcgtcg
ctgcgcgcctatcccggtgcggtgtgggtcgtcgggggcgatctgaagggcgtcgacatc
gcagagctcgtcgcggacgtcggatcgacggcgcgcgccgcagtggtcatcggcgtggag
cgcgccgaggtcgtcgcggcattcgcacgacacgcgccggcggtgccggttttcgaggtc
gtcactggggacactggagaggtaatgaaccgcgtcgtggagatcgcgaccgggatcgtc
gatggggagggcacggtcctgctggcccccgccgcggcatccttcgaccagttctccagc
tacgcggaccgcggccgccgcttcgccgaagcggtgcagggatggatcgaccgggggagc
gcgcatgacgcaggtggctcgcccgaagcgcactga
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