Microbacterium triticisoli: OED01_11775
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Entry
OED01_11775 CDS
T11496
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mimz Microbacterium triticisoli
Pathway
mimz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mimz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OED01_11775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mimz03000
]
OED01_11775
03400 DNA repair and recombination proteins [BR:
mimz03400
]
OED01_11775
Enzymes [BR:
mimz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OED01_11775
Transcription factors [BR:
mimz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OED01_11775
DNA repair and recombination proteins [BR:
mimz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OED01_11775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UYO96277
LinkDB
All DBs
Position
complement(2394521..2396002)
Genome browser
AA seq
493 aa
AA seq
DB search
MSLTMLTFDERYRAIDARDVRFDGQFVTAVRSTGIYCRPSCPARTPKPENVTFFPTSAAA
HEAGYRACKRCLPEAAPGSPEWNLRGDATARAMRLIADGVVEREGVPGLAARLGYSSRHL
TRLLTNELGAGPLALARAHRAHTARMLLVGTDMPISDVVFSAGFASIRQAGDTIREVFGM
TPTELRARRHRTSVCAPGEIDLLLPHREPLDAAGVFAWMSIRALPGVEQATATSFARHLR
MPGGPAWFEIREQEGRLRLRARVSRLGDLTPLVATARRLFDLDADPVAVDAALANHPELA
DAVARTPGIRVPGAADPHEMLIRAMVGQQITVAAARTALTALADRLGERVDDGILFPTMA
AIAEHGSEVLRGPAARIRAITHAAASLADGGLRLTVGDDALEQRAALIAMPGIGPWTAGY
VGMRVLGDPDVFLPGDVAVRSGAAALGIPSDPAALTAWATRTAPWRSYLTAHLWRAAPVR
TPRTRSNRTEENS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgacgatgttgaccttcgatgagcgataccgcgccatcgacgcgcgcgatgtc
cgcttcgacgggcagttcgtcacggccgtgcgctcgacggggatctactgccgacccagt
tgtcctgcgcgcacgcccaagcccgagaacgtcacgttcttcccgaccagtgctgcggcg
cacgaagccggttaccgtgcctgcaagcgctgccttccggaggcggcgcccggttctccc
gagtggaatctccgcggagacgcgacggcgcgggcgatgcgcctgatcgccgacggcgtc
gtcgaacgcgagggggtgccgggtctcgccgctcgcctgggctactcgagccggcatctg
acccgactgctgacgaacgagctcggtgccggaccactcgcactggccagggcgcatcgc
gcgcacaccgcccggatgctgctggtcggcaccgacatgccgatctccgatgtcgtcttc
tcggccggcttcgccagcatccgtcaggcgggggacacgatccgcgaggtgttcggcatg
accccgaccgaactgcgcgcccggcgccaccgcacgagcgtgtgcgctccgggcgagatc
gacctgctgctgccgcatcgcgaaccgctcgacgccgcgggcgtgttcgcctggatgtcg
attcgcgctctcccgggcgtcgaacaggccacggcgacatccttcgcgcgtcatctgcgg
atgcccggcggcccggcatggttcgagatccgagagcaggaggggcgcctgcggctgcgg
gcacgggtcagccggctcggcgacctgacgccgctcgtcgcgacggcgcgtcggctgttc
gatctcgacgccgaccccgtcgccgtggatgccgccctcgcgaaccacccggagctcgcc
gacgcggtggcccgcacgccggggatccgcgtccccggcgccgccgacccgcacgagatg
ctcatccgcgcgatggtgggccagcagatcacggtcgccgcggcgcgcaccgcgctgacg
gcgctcgccgaccggctgggcgaacgggtcgacgacggcatcctcttcccgacgatggcg
gccatcgccgagcacggctccgaggtgctgcgcggacccgccgcacggatccgcgccatc
acgcacgcggcggcgtccctcgccgacgggggtcttcgtctcaccgtcggcgacgatgcg
ctggagcagcgcgccgcgctgatcgccatgccgggcatcggcccctggacggccggctac
gtcgggatgcgcgtgctcggcgaccccgacgtgttcctcccgggagacgtcgccgtccgc
tcgggcgccgcggcgctcggcatcccgtccgatcccgccgctctgacggcctgggcgacc
cgtacagcgccgtggcgcagctatctcaccgcgcatctgtggcgggcggcgcccgtgcgc
accccgcgaacccgctcgaatcgaaccgaggagaactcatga
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