Microbacterium sp. M28: OED01_12860
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Entry
OED01_12860 CDS
T11496
Name
(GenBank) FAD-binding protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mimz Microbacterium sp. M28
Pathway
mimz00020
Citrate cycle (TCA cycle)
mimz00190
Oxidative phosphorylation
mimz00650
Butanoate metabolism
mimz00720
Other carbon fixation pathways
mimz01100
Metabolic pathways
mimz01110
Biosynthesis of secondary metabolites
mimz01120
Microbial metabolism in diverse environments
mimz01200
Carbon metabolism
Module
mimz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mimz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mimz_M00149
Succinate dehydrogenase, prokaryotes
mimz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mimz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OED01_12860
00650 Butanoate metabolism
OED01_12860
09102 Energy metabolism
00190 Oxidative phosphorylation
OED01_12860
00720 Other carbon fixation pathways
OED01_12860
Enzymes [BR:
mimz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OED01_12860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
FAD_binding_3
DAO
HI0933_like
Pyr_redox_2
Thi4
Pyr_redox_3
GIDA
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
UYO96486
LinkDB
All DBs
Position
2633314..2635044
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AA seq
576 aa
AA seq
DB search
MSTRERQISTTVLVIGTGGSGLRAAIEVAEQGVDVLAVGKRHRTDAHTSLAAGGINAALG
TMDAEDSWQQHAADTITESYLLANPHTVEVVTRGAERGIRDLERWGMDFAREDDGRISQR
FFGAHTFRRTAFAGDYTGLEIQRTLVRRAEQLDVPILDGVYITRILVKDNVVFGAYGFDQ
ADGTRYLIHADAVILAAGGHNRIWRRTSSRRDENTGDSFRLAVDAGARLRDPELVQFHPS
GIIEPENAAGTLISEAARGEGGILRNALGERFMATYDPDRMELSTRDRVALAAYTEIQEG
RGTSNGGVWLDVSHLPRETIMTRLPRVYQTMLELQMLDITTDPIEIAPTAHYSMGGVWVR
PEDHGTDVDGLYAIGEASSGLHGANRLGGNSLIELLVYGRLVGQAAITHASGLDAQRRSA
DAVAHARAEIDDLLAADGRENVRALQRAIRNTMTEHAGVVRSEEGLRAGLAELDMIEGRM
ADVGIHPDIAGFQDLAHAFDLKASALAARATLEAARERRETRGCHNRSDFPDMDPTLQVN
LVWSPTTGVTREEIPAVPAEIAALMRDVDTEGKLVE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcgcgaacgccagatctccaccaccgtcctcgtcatcggcaccggcggctcc
ggcctccgcgccgcgatcgaggtcgccgagcaaggcgtcgacgtccttgcggtcggcaag
cggcatcgcaccgacgcgcacacctcgctcgccgcgggcggcatcaacgcggctctgggg
acgatggatgccgaggacagctggcagcagcacgccgccgacacgatcaccgagagctac
ctgctcgccaacccgcacacggtcgaggtcgtcacgcgcggcgccgaacgcggtatccgg
gacctggagcgctggggcatggacttcgccagggaggacgatggccgcatctcgcagcgg
ttcttcggggcgcacaccttccggcgcaccgctttcgccggtgattacacggggctcgag
atccagcgcacgctcgtccggagggcggagcagctggacgtcccgatcctcgacggcgtc
tacatcacccgcatcctcgtgaaggacaacgtggtcttcggcgcctacggcttcgaccag
gccgacggcacccgctacctgatccatgcggatgccgtcatcctggccgccggtgggcac
aaccgcatctggcgccgcacgtcgtcgcgccgcgacgagaacaccggcgactcgttccgc
ctcgccgtggatgcgggggcgcggctgcgcgaccccgaactcgtgcagttccacccgtcc
gggatcatcgaaccggagaacgcggccggaacgctcatctcggaggcggcccgcggggag
ggcgggatcctccgcaacgccctcggcgagcgcttcatggcgacgtacgatcccgatcgc
atggagctgtcgacgcgcgaccgcgtggcgctggccgcctacaccgagatccaggaaggg
cgcggcacctcgaacggcggcgtgtggctggacgtctcgcacctgccgcgcgagacgatc
atgacccggctcccccgggtctaccagacgatgctcgaactgcagatgctcgacatcacg
acggatccgatcgagatcgcgccgaccgcgcactactcgatgggcggtgtctgggtgcgg
ccggaggatcacggcaccgacgtggacggactgtacgcgatcggcgaggcatccagcggc
ctgcacggcgcgaaccgtctcggcggcaactcgctgatcgagctgctcgtgtacggccgg
ctggtcggtcaggccgcgatcacccacgcctccggcctcgatgcgcagcgccggtcggcg
gatgccgtggcgcacgcgcgagcggagatcgacgatctgctcgccgccgacggacgcgag
aacgtgcgggccctgcagcgcgcgatccgtaacacgatgaccgagcacgcgggtgtggtg
cggtccgaggaggggcttcgggccgggctcgccgagctcgacatgatcgagggacgcatg
gcggacgtcggcatccacccggacatcgccggcttccaggatctcgcgcatgccttcgac
ctgaaggcgtcggcgctggccgcccgagcgacgttggaggccgcccgcgagcgtcgggag
acccgcggttgccacaaccgcagcgacttccccgacatggacccgacgctccaggtgaat
ctcgtctggtctccgacgacgggggtgacccgcgaggagatccccgcggtgcccgctgag
atcgccgccctcatgcgcgacgtcgatacggagggcaagctcgtggagtga
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