Methylacidiphilum infernorum: Minf_0648
Help
Entry
Minf_0648 CDS
T00727
Symbol
rpoN
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
KO
K03092
RNA polymerase sigma-54 factor
Organism
min
Methylacidiphilum infernorum
Pathway
min02020
Two-component system
min02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
min00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Minf_0648 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Minf_0648 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
min03021
]
Minf_0648 (rpoN)
Transcription machinery [BR:
min03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Minf_0648 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_11
HTH_23
TrmB
Sigma70_r3
LacI
HTH_Tnp_ISL3
MarR_2
HTH_Crp_2
HTH_IclR
DUF4252
MarR
Motif
Other DBs
NCBI-ProteinID:
ACD82703
UniProt:
B3E042
LinkDB
All DBs
Position
624986..626362
Genome browser
AA seq
458 aa
AA seq
DB search
MSTSLGLYQSIKLHQALSPQMQHSLAILQAPAVELSTIIQQELLSNPLLEISEDKPLEGQ
SLEGLFHEKEKWYDYLGPNFEGAQRSIEDERKRQFFFDSQVVPPSMASELSRQLSLVCSD
NTLLQAAQYIIGNLDERGYLNTELENIAHELGLAYDLVEKALELVQSLDPPGIAARNLSE
CLLLQLKALGKENSLEFRIISEYLTLLERKKLTEIAKQLKVSLKQVQEAVESIRSLNPFP
GSKYRSEEKEKIIQVDLMVVKEAQDWKVYFNDEFMPRLRINHHYESLLSKNDKDPSLKNY
LKEKKRSGLFLIKCLRMRENTLLKVAEAIVHCQKDFFDSGPHALKPLTMSEIAQKIDVHE
TTVSRAIANKYVKTPHGIFELKYFFNSGFQKQTGEFVANQTIKEAIERLIRNEDPRSPLS
DQQIVELLAKEGIKMARRTVAKYRAHLKILPSHLRRIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacatcgttaggtctttatcaatcgattaagttgcatcaggcattgtcgccccaa
atgcaacattctttagctattttgcaagctcctgccgtagagctttctacaatcatccag
caggagttgctttccaatcccctgctggaaatttctgaagacaaacccttggaaggccaa
tccctagaagggctgtttcatgaaaaagaaaaatggtacgactacttgggacccaatttc
gagggggctcaaagatcgatcgaggatgaaagaaaacggcagttctttttcgattcccag
gtcgttcctccatccatggcttcggagctttcgaggcaactttccttggtttgcagtgat
aacactcttttgcaggcggcccaatacatcattggtaacttggatgaaaggggatactta
aacacggaattggaaaacatcgcccatgaactgggtttagcttacgatttggtggagaaa
gccctggaacttgtccagtcccttgatccgccgggtatagccgcaagaaatctttccgag
tgcctgttgttgcaactcaaagcgttgggaaaagaaaactctttggagttcaggattatt
agcgagtatttgaccctgctcgaaaggaagaaattgactgaaatagcaaaacagttgaaa
gtgagcctcaagcaagttcaagaagcggttgaatccattcgctcccttaatccttttccc
ggttcgaagtatcgcagtgaagaaaaggagaagattatccaggttgatctcatggtcgtt
aaagaagcgcaagactggaaagtttacttcaatgatgagtttatgccccggttacgcatt
aatcatcattatgaaagcctgctgagtaaaaacgacaaggatccgagcttgaagaattat
ttgaaggagaagaaacgttcgggactcttcttgattaagtgcttaaggatgagggaaaac
acccttttgaaggttgccgaagccattgtccattgccagaaggatttttttgattctggt
ccccatgctttaaaacccttgaccatgagcgaaatagctcaaaaaattgatgtccatgaa
acgacggtgagtcgggccatcgccaataagtatgtaaaaacccctcacggtatctttgaa
cttaaatatttttttaattcgggttttcaaaagcaaaccggagagtttgtcgccaatcag
accattaaagaagccatagagaggctgatccgtaacgaggatcccaggtctcccttatcg
gatcaacaaatcgttgaacttctggccaaagaagggataaaaatggcccgaagaaccgtc
gccaagtatagggctcacttgaagatcttgccgagccatttacgccggataagctaa
DBGET
integrated database retrieval system
