Methylacidiphilum infernorum: Minf_0652
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Entry
Minf_0652 CDS
T00727
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
min
Methylacidiphilum infernorum
Brite
KEGG Orthology (KO) [BR:
min00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
min03016
]
Minf_0652 (rnd)
Enzymes [BR:
min01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Minf_0652 (rnd)
Transfer RNA biogenesis [BR:
min03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Minf_0652 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
HycH
Motif
Other DBs
NCBI-ProteinID:
ACD82707
UniProt:
B3E046
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All DBs
Position
complement(630672..631646)
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AA seq
324 aa
AA seq
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MVSLCQGQHLAVVDCLKDDLSALWDILSRSEWICHGMDYDLKMLRKAGCPQPRTIFDTHI
AAKLCGFEAVGYARLVSLFFQVKLTKEHQKADWSRRPLPPSLINYTAKDVLYLEKLKEIL
TRLLKSLGRWEWMEQSCKRIQRKIENSFLGSPKEWERIEGVHKLDFLGQSILFELQKWRK
ELALLRDTPPFKIIKSEDLVQISFISAHGGSIAAIPAVQRLEREVVGDLLKAIEKGKQNG
SWKESPGPKKLFLFDKEAAKRFEVLKNKRDKIASFLGIDPALIASRNLLSEMALHPGSGC
QKLIDEDKICPWQAQLLGLSTTPD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtggtctccctatgccaaggacaacatttggccgttgttgactgccttaaagatgaccta
tccgccctctgggacattctttccagatccgaatggatctgccatggaatggattacgat
ttgaaaatgctcagaaaggccgggtgccctcaaccccgaactatctttgatacccacatc
gctgctaaactttgtggttttgaagctgtcgggtatgctcggcttgtttccttatttttc
caggtcaagctgaccaaagaacatcaaaaagccgattggtcccgtaggccccttcctccc
tctctcatcaattatacggccaaggatgtgctttatcttgaaaaactcaaagaaatttta
acgaggctcctcaagagcctagggagatgggagtggatggaacaaagctgtaaaaggatc
cagagaaaaatcgaaaattcttttcttggttctccgaaagaatgggaaaggattgaagga
gttcataaactcgatttcttgggccagtccatcttgttcgaactgcaaaagtggcgcaaa
gaacttgcccttttaagagacacccctccattcaaaatcatcaagagcgaagatctcgtt
caaatcagttttatttctgctcacggtggatcgattgcagcgattcccgctgttcaaaga
ttggaaagagaagtcgttggggatttgctcaaagctatagaaaagggaaaacaaaatgga
tcttggaaagaatcgcccggacccaaaaaattatttctttttgataaagaagcggccaaa
agatttgaagtactaaaaaataaacgagacaaaatcgcttcttttctcggtatagatcct
gccttgatcgcctcgagaaaccttttgtcagaaatggcgctccaccccgggtcgggttgc
caaaagctgatcgatgaggataagatttgcccctggcaagcgcaattactgggattgtcc
accacccccgactga
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