Methylacidiphilum infernorum: Minf_0908
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Entry
Minf_0908 CDS
T00727
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
min
Methylacidiphilum infernorum
Pathway
min03030
DNA replication
min03430
Mismatch repair
min03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
min00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Minf_0908 (dnaE)
03430 Mismatch repair
Minf_0908 (dnaE)
03440 Homologous recombination
Minf_0908 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
min03032
]
Minf_0908 (dnaE)
03400 DNA repair and recombination proteins [BR:
min03400
]
Minf_0908 (dnaE)
Enzymes [BR:
min01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Minf_0908 (dnaE)
DNA replication proteins [BR:
min03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Minf_0908 (dnaE)
DNA repair and recombination proteins [BR:
min03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Minf_0908 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
ACD82963
UniProt:
B3DUG0
LinkDB
All DBs
Position
complement(868305..871784)
Genome browser
AA seq
1159 aa
AA seq
DB search
MNGNFVHLHLHSEYSLLDASARIKDVVSKAKQLGMPAVALTDHGNLYGTIDFYKACVSQN
IKPIIGCEAYITSGSRFDRKGSRSHIYHMTLLAKNNQGYKNLLKLISKAHLEGFYYKPRI
DLELLKEHKAGLIGTSGCMNGEIPQKILEGDLKGAKKLAEELSRLFDPNCFYLEIQNHGL
KEEKEIREVLADFAQSLGLPLVATNDVHYVEQEDAQFHDVLLCIGTASQIHDPKRKKYPC
PEFYFKTPQQMAELFNEFPQAVENTANIARLCDVTIELGKNHFPSYTLPSPYKTHGEYLR
TLCYEGLQKRYDNISEQIKERLEYELSVIEQTGFSSYFLIVWDFIHYAKKEGIPVGPGRG
SAAGSLTAYVLGITDIDPIKYGLVFERFLNPQRVSPPDIDIDFCYNRRSQVIDYVRKKYG
ERSVAQIITFGTLGAKMAVRDVARVLGMSYQEADRIAKMIPPDPQLTLERARELNPQLDQ
LWENDPQSREVLTIATKLEGLTRQAGVHAAGVVISEGDLLDFIPLSRGEHNEIVTQWSME
PIAEIGLLKMDFLGLKTLTVISECLALIKEKENILLDPKQFPLDDKNTYELLGRGQTIGV
FQLESSGMVELVKKLKPGNIEDIIALVALYRPGPMENIPAYADRKLGKVPITYDHPLLEP
ILKDTYGVMIYQEQVMQAANVLAGYSLGESDLLRRAMGKKKPEEMRKQRDQFIKGCKEKN
NIPEEKAIQIFETLEKFAGYGFNKAHSACYGYLAYVTAYLKANYPVFYLCTLLSYESGDT
EKIELLVSECRRMGIGVLPPDISKSEVRFSVEGGSIRWGLSAIKNVGEAAAEAIVESRKK
RGSYHSLFDLCLRISGRTLNKKILESLIKSGACDSLGRSRKELLESLPAALSAGSITSKE
RLSGQQNLFEEHNFIDPTDRQSSAKGEDYPLNIRLHWEKELLGTYLSSHPLDEWMSWIRL
FQNEPISSLKELADNSRLYVPGMITHIEKKTSQKSKKPYFKLILEDQTGHIEVILFKDNL
SSSLIDHWTTTAFVVDGQLSCRENAVSIRSEHLYTIEEALQSLPTSLVITVKEGQGGADP
WKKLYELFLENRGDIPVVFRYVKNEGIICNIEVGREFFVKLSIPFMEKLFSLFTPGSINL
ELKKPQYNSYSRRKNERSS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaactttgttcatctccatctccattctgaatacagtcttcttgacgcatca
gcgcggattaaagacgttgtcagtaaagccaaacagctgggcatgcctgccgtggccctg
accgatcacggcaatctttatggaacaattgatttttacaaggcttgtgtgagtcaaaac
atcaagcccattatcggatgcgaggcttatatcacatcgggaagccggtttgacaggaaa
ggaagcaggtcccacatctatcacatgaccctgctcgccaaaaacaaccaaggttataag
aaccttttgaagctcatctccaaagctcacctagagggattttattacaagcctagaata
gaccttgaactgctcaaagaacacaaggccgggttaatcggcacaagcggatgcatgaac
ggagagattccccaaaaaatacttgaaggagatctgaagggagcaaagaaattggccgaa
gaactgagccggttatttgatcccaactgtttttatcttgaaatacaaaatcacggccta
aaggaagaaaaagaaataagagaggtgcttgccgatttcgcccaaagtcttggcctgcct
ttggtggccaccaacgacgttcattacgtagaacaagaggatgcccagtttcacgacgtt
ttactctgcatagggacggcaagccaaatccatgatcccaagagaaaaaagtatccatgc
cccgagttttacttcaagactcctcaacaaatggccgagttgttcaatgaatttcctcaa
gctgtggaaaataccgcgaatatcgcccgcctctgtgatgtaactatagaactgggcaaa
aaccattttccttcttatacccttccatctccttataaaacccacggagaatatttaaga
acgctctgttatgaaggtctccagaaaaggtacgacaatatcagtgagcagataaaagaa
aggttggaatacgagctttctgtcatcgagcaaacgggtttttcgagttatttcctcatc
gtttgggatttcatccattatgcaaaaaaagaaggcatacccgtcggtccaggtagaggg
agtgctgcagggagtctaaccgcctatgttctaggaataaccgatattgatccaatcaaa
tatggcttggttttcgaaagattcttaaatcctcaaagagtttctcccccggatatcgat
attgacttttgttataaccgaagatcgcaggtcatcgattatgtaaggaaaaaatatgga
gagcgttccgtggcccaaatcatcacctttggcacactgggggcaaaaatggctgtcagg
gatgtagcccgagttcttgggatgagttaccaagaagccgatcggatagccaaaatgatc
cctcctgatcctcaattgaccttggagagagcaagagaactgaatccacagctcgatcaa
ctttgggaaaacgatcctcaaagcagggaagttctgaccatagctaccaagcttgaaggg
ttaacaagacaagccggagttcatgctgccggagtcgtgatttcagaaggagacctgctt
gatttcattcccctgtcccggggtgaacataacgagatcgtaacccagtggtccatggaa
cctattgccgaaatagggctactcaaaatggattttttgggactcaaaaccctgaccgtt
atttctgaatgtttagccttgataaaagaaaaagaaaatatacttctcgatcccaaacaa
tttccccttgatgacaagaacacttacgagcttttggggcgaggacaaaccattggagta
tttcaactggaatcttcgggcatggtggagctcgtcaaaaagctcaagcccgggaacatt
gaagacattatcgctttagtagccctttacagaccgggaccaatggaaaacatcccggcc
tatgcggataggaaactaggaaaagtgcccattacctatgatcatcctcttctagaaccc
attctcaaagatacgtacggggtgatgatttaccaagaacaggttatgcaagcagccaac
gttcttgcagggtattccctgggagaatccgacctgctcaggagagctatggggaagaaa
aagcctgaagagatgcgcaagcaaagggaccagtttatcaaaggttgcaaggaaaaaaac
aatattcccgaagaaaaagcgattcagatttttgaaaccctagaaaagtttgctggctac
ggttttaataaagcccatagcgcctgttacggctatcttgcttatgttaccgcctattta
aaagccaattacccggttttttacctgtgtacacttctttcctatgaatccggggacacg
gaaaaaatagaactgcttgtatccgaatgccggagaatgggcatcggggtattgcctccg
gatatttccaaaagtgaagtccgtttttcggtcgaaggcggctccatccggtggggacta
tcggctatcaaaaatgtcggagaagcagccgctgaggccatagttgaatcgaggaaaaaa
aggggctcctaccattctctctttgatttatgcttaaggataagcggtcgaactttaaac
aaaaaaatcctagagagtttaattaagtcgggggcttgtgacagcctcgggagaagtcga
aaggaattgttagagagtttgcctgcagctttatccgcaggaagcataacctcaaaggaa
agattaagcggtcaacaaaacctttttgaagagcataatttcattgatcctaccgatcgg
cagtccagcgcaaaaggtgaagactacccattgaacatccgtcttcactgggaaaaagaa
ctcttaggaacttacctcagcagtcatcccttggatgaatggatgtcgtggataaggctt
tttcaaaacgagcctatctcctccttaaaagagcttgccgataatagccggctttatgtc
cccgggatgatcacccatattgaaaagaaaacatcccagaaatccaaaaagccgtatttt
aaactgattctcgaagaccaaacgggtcacatcgaagtcatcctttttaaggataatctg
tcgagttccttgatcgatcactggacaacaacagcctttgtcgtggatggacaactcagc
tgtagggaaaatgcggtttcgatccgatctgaacatctttacaccattgaagaagccctg
caaagcttaccgacatctcttgttataaccgtaaaagaaggacaggggggagctgatcca
tggaaaaaactctacgagcttttcctggaaaaccgtggcgacatccctgtcgtttttcgc
tacgttaaaaacgaggggatcatttgcaacatcgaagtgggtagagaattttttgtcaag
ctttccattccttttatggaaaagcttttctccctgtttacccccggatcgataaacctg
gaattaaagaaaccacaatacaactcctactcgaggagaaaaaacgaacgctcatcatga
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