Methylacidiphilum infernorum: Minf_0946
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Entry
Minf_0946 CDS
T00727
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
min
Methylacidiphilum infernorum
Pathway
min03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
min00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Minf_0946 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
min03400
]
Minf_0946 (alkA)
Enzymes [BR:
min01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Minf_0946 (alkA)
DNA repair and recombination proteins [BR:
min03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Minf_0946 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HHH
Motif
Other DBs
NCBI-ProteinID:
ACD83001
UniProt:
B3DUJ8
LinkDB
All DBs
Position
906662..907624
Genome browser
AA seq
320 aa
AA seq
DB search
MKRALSVFKNMPEYSLEQVVHDWSLIGEYGKDLVDVDATLGSGQAFSWQRIAKGSWIGQV
GADPYALIPGEKNLNVYSPRGSFCAFQEYFQTEFDLEKVFQSFPPGDLVLERARCSCPRL
RILKQDPWETLVCFLSSSAKPIVQIRKICGRLRAFYGKEIYPRFFSFPSAEDIIVKGPEG
LKQARLGFRANFIWKVSTILSKLKPNLLLELKDAPTGDIRQILMELPGVGRKIADCVLLF
GYGRLEVFPIDRWMERVLRTFYSPLLKRAQPSHKELLEFSSTYFGPFAGYAQQYLFYWAR
TAFWKKGGLWEYHERDGAKI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
ttgaagagagctttaagtgtatttaaaaatatgccggagtattcccttgagcaagtagtt
catgattggtctctaattggagagtatgggaaagatctcgttgatgtagatgctacactg
ggatctggccaagccttttcttggcaaagaatagccaaaggctcgtggataggacaagtg
ggggcggatccttatgccctgattcccggtgaaaaaaaccttaatgtttacagtccacgg
ggatctttttgtgcttttcaagagtatttccaaacggaattcgatcttgaaaaagtattc
caaagttttcccccaggagatttagttttggaacgggctcggtgttcttgtcctcgatta
aggatattaaagcaagacccctgggaaaccctggtctgttttctctcttcttctgcaaag
cccatagttcagatccgtaaaatctgtgggcggctacgggctttttatggaaaagaaatc
tatcctcgatttttttcttttccttcggctgaagacattatagtcaagggtccggaggga
ttaaaacaagcaaggcttggtttccgggcaaattttatctggaaagtatcgacaatcctt
tcaaagttaaaacccaatttattgcttgaacttaaagatgctcctacaggagatattagg
cagatccttatggaattgcctggggtgggaagaaaaatcgccgattgcgtcctgcttttc
ggatatggtagattagaggtcttccctatagacaggtggatggaaagagtgttacggact
ttctattctcccttgttaaaaagagcgcaaccctctcataaagaacttcttgaattttcc
tcaacctattttggtccctttgccggctatgcccagcaatatcttttttattgggccaga
acggccttctggaaaaaagggggactttgggaataccatgaaagggatggggctaaaata
tga
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