Methylacidiphilum infernorum: Minf_1400
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Entry
Minf_1400 CDS
T00727
Name
(GenBank) HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
min
Methylacidiphilum infernorum
Brite
KEGG Orthology (KO) [BR:
min00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
min03019
]
Minf_1400
Messenger RNA biogenesis [BR:
min03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Minf_1400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACD83454
UniProt:
B3DVV1
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Position
1301988..1303100
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AA seq
370 aa
AA seq
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MSNEEKFDCLSILSEKTIRQGTLQGTIRCQVLSIKESTSKNGSVFLDIEVADQSGNKRIK
IWPESQAYSAFLSLPQNAFIELSAIFRYTPFGLQAYAHALRTLNLEEIEGLLNTKGNIQV
EKDWEFLHAKIATLKDPRLRVLCQQFLLLYGEKLRRAAAAREYHHNFRGGLLRHVCQMIE
AADALMLAYPSYNWDLVKAGILFHDCGKLWENDFQEKGFAMKRNKSAELIGHIPLGVEVV
NSLWRSLQKNEEFLNNSIPPTEEVRIHLLHLIIAHHGLKEHGSPITPRTPEAWIIHVLDN
LDAKLEMFRCAYAEGKEISPGIFERKPPLEGNPVAPLDKYSSFSTPPEQSNPFLDAYDLP
KKASEKPSEG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgaagaaaaatttgattgcctctctatattatctgaaaagaccatacgccaa
ggaactctccaaggcacaattcgctgccaggttttatccatcaaagaatccacatctaaa
aacggttcggttttccttgatatagaggttgcagatcaatccggcaacaaaagaatcaaa
atatggcctgagtctcaagcttattctgctttcctctccttgccacaaaacgctttcatt
gaactatccgcgatttttcgttatacccctttcggcttacaagcttatgctcatgctcta
agaaccctcaatctcgaagaaatagaaggattgttgaatacaaaggggaatatccaggta
gagaaagactgggaatttcttcatgcaaaaatagctaccctaaaagatccacgcctgcga
gttctctgccagcaatttcttttgctctacggcgagaagctgagaagagccgccgcagca
agagaatatcatcataattttcgagggggacttcttcgccatgtttgtcaaatgatcgaa
gcggcggatgccctgatgctagcctatccctcttataactgggaccttgtcaaagcgggt
atacttttccatgattgtgggaagctttgggaaaacgatttccaggaaaaaggttttgcc
atgaaaaggaataagtccgcggaactgatcggtcatattccacttggagtagaagtcgtc
aattcattgtggagaagcttgcaaaaaaacgaggaatttctcaataactcgattcctccc
acagaagaggttcgcatccatcttcttcatttgattattgcgcaccacggtcttaaagaa
cacggttctccgattactccccggactcccgaagcttggattatccatgtactggataat
cttgacgccaagttagagatgttccgctgtgcctatgctgaaggaaaagaaatttcaccc
ggaatctttgaaaggaagcctcctcttgaaggaaaccctgttgccccgctcgacaagtat
tcttccttttcaactcccccagaacaatctaacccctttttggacgcctatgatctgcca
aaaaaggcttctgaaaagccatcagaaggataa
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