Mangifera indica (mango): 123192200
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Entry
123192200 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC123192200
KO
K08518
syntaxin-binding protein 5
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123192200
Membrane trafficking [BR:
minc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123192200
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
123192200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
PEP5_VPS11_N
WD40
WD40_WDHD1_1st
WD40_Prp19
Synaptobrevin
WDR55
Beta-prop_IFT140_1st
Lgl_C
CPSF_A
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
123192200
NCBI-ProteinID:
XP_044460605
LinkDB
All DBs
Position
12:complement(10031442..10040887)
Genome browser
AA seq
1122 aa
AA seq
DB search
MFNFFRKNSNQEPPPPQIQGSLTLTDLNPRVTLHYGIPCAASILAFDPVQSLLAVGTWDG
RIKVIGDYNVEGLLVSPKQLPFKNLEFLQNQGFLVSVSKENEIQVLILRIRAASSCYKVW
DLEHRQMTSKLKWESNITAFSIIYGTSYMYLGDEYGSVSVLKYDAEEGNLLQLPYYVPTN
IIAETAGIPLSYHNSVVGVLAQPYSLGERLLIAYENGLVILWDVSEDRVVLVRGNKDLQL
VSKTVVNSSKSARQEPSESESDHGQAEKEISSICWASTNGSVLAVGYVDGDIMFWNIPTA
APSKDQKTESSSNNVVKLQLSSTRKRLPIIVLHWSVDRSKNDCGGRLYVYGGDEIGTEEV
LTMLYLDWSSGIESLKCIDRVDITLNGSFADMVLLPIAGLVEGFGFLLFVLTKPGQLHVY
DDACLSSLISPQEKKTSTSPLQYPEVIPTIEPYMIVGKLGLVHRDGKFSRDFSKIVFAVK
ARASHVLVTPMTGRTKWPLTGGVLCQFHGAEDYLVEKLYVAGYQDGSVRIWDATYASLSL
IYVLGSELLGTKIGSANAPVSALDFCTNSLNLAVGYANARVLLYKLVGSANETSLNFVTK
TGKEVYSLPKGDGPQCTAVFSFIGSPVCNLQFSNTGDILAVGFECGQVAVLDISSSSVLF
LTDSVSDSSSPVISLGVKSFPNTNNSINSLKDSNLDTSENPTRNVVFFMTKDGHIVVCDS
TTGKILASQSLHLKESSAISMYILEDDGSLISELSSAKHSVSSPQDSEPKNEPTQVNAKH
GSIPLVAELETSTETTYSGQRLMELFILLCCENALWLYSLNSVIQGDSNSIRKVHLLKPC
CWTATFKKDEKYGLFIVYQTGEIEIRSLPSLQVVVETSLMSILRWNFKTNMEETMCSCNG
QIVLINGYEFAFISLLASENDVRIPESLPCLHDKVLAASANPANIFQGTVPAFFSGLVKG
FKGXKEHNVDLPGPEVGIHNCDHLDTIFSYPPFLKPSKDDQNVVELNLDDIKIDEPLVVS
SSSRKSKNDEKDKRMKKEKLFEGANTETKPKPRTVEEIKAKYRKPGDAFSAAAEARNKLA
ERQEKLEKLRDNTEELQDGAQNFADMASELAKAMEKRKWWKL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatttttttcgtaaaaactccaaccaagagccacctcctcctcagatacaggga
agtttgacactgacagacttgaatccacgcgtcactcttcattatggaataccgtgtgca
gcatctattctagcttttgatcctgttcaaagtctattggcagtagggacatgggacggt
agaataaaggtgattggcgactataatgttgaagggcttcttgtatctcctaagcagtta
cctttcaaaaatttggagtttctacaaaatcaaggtttcctggtcagtgtctcaaaggaa
aatgaaatccaggtactgattcttcgtattcgggctgcaagttcttgttataaggtttgg
gacttggaacacaggcaaatgacatctaaattaaaatgggagtccaacataactgctttc
tctattatttatggcaccagttacatgtatcttggagatgagtatgggtcggtgtctgtg
ttgaagtatgatgctgaagaaggaaatctcttgcaactgccatattatgttcctacaaat
attatagctgagacagctggaattccgttatcttatcataattctgttgttggagttcta
gcccaaccttattcactgggagaaagattgctgattgcgtacgagaatggcttggttatt
ctttgggatgtttctgaagatagagttgttctagttagagggaacaaagatctccaatta
gtaagtaaaacagttgttaattcttcaaaaagtgcaagacaggagccttctgaaagtgaa
tcagaccatggacaagcagagaaagaaataagctccatctgttgggcatctaccaatgga
tcagttcttgctgttggttatgtggatggggatataatgttttggaacataccaactgct
gccccatctaaagatcagaaaactgaaagttcatctaataatgttgttaagctacaatta
tcatcaaccaggaaaagactccctatcattgttttgcattggtctgttgatagatcaaag
aatgattgtggtggccgactctatgtctatggtggtgatgaaattggaactgaagaagtc
ttgacgatgctataccttgattggtcttctgggatagaaagtttgaagtgcattgaccgt
gtagatattacacttaatggttcttttgctgatatggttttattacctattgctggtttg
gtggaaggttttggctttttgctatttgtattgacaaagccaggacaattgcatgtttat
gatgatgcttgcttgtcttctttaatctctccgcaagagaaaaaaacttctacttctcca
ttacaatatcctgaggtcattcccaccattgaaccatacatgattgtgggaaagcttgga
ttggtacacagagatggaaaattttcgagggatttttctaagatagtttttgctgtaaaa
gctcgagcatcccatgtactggtgactcccatgactgggagaacaaagtggcctttaact
ggaggtgttctctgccaatttcatggagctgaagattatctggttgagaaattatatgta
gctggttaccaagatggatctgttcgaatatgggatgctacatatgcttctttgtcactt
atttatgttttaggttctgagcttttaggtacgaaaattggtagtgctaatgctccagta
tcagcattggacttttgcacaaactcattaaatttagctgtcggctatgcaaatgctagg
gttttattgtataagctagtggggagtgcgaatgaaacgagtttgaactttgtgacaaaa
actggaaaagaagtctacagtttgcccaaaggggatgggcctcagtgcacggcagttttt
tccttcatcggttctcctgtttgcaacctacaattttcaaatactggagacatacttgct
gtaggatttgaatgtggccaggttgctgtacttgatattagttcatcatcagtcttattt
cttacagatagtgtatcagattcaagttcccctgtcatatcattgggggtgaaatcattt
cccaataccaataactcaataaacagtctaaaggactccaatttagacacttcggaaaat
cctacaaggaatgtggtattttttatgacaaaggatggacatattgttgtttgtgatagc
accactggaaaaattcttgcctcccagtcactgcatctgaaggaatcaagtgcaatttct
atgtatattctagaggatgatggcagcttgatctctgaattgtccagtgcaaagcattca
gtgagctcacctcaagacagtgaacctaaaaatgaacctacacaagttaatgctaaacat
ggaagtattccactggtagctgaactcgaaacttccactgaaaccacatattctgggcag
aggttaatggaactattcatattactttgctgtgagaatgcattgtggttgtattctttg
aattctgtaattcagggggatagcaactccattcggaaggtgcatcttttaaagccatgt
tgttggaccgcaaccttcaagaaagatgagaagtacgggctatttatagtctatcagaca
ggggagattgagataaggtctttgccatctcttcaagtggtggtagaaacttctctaatg
tcaatactaaggtggaacttcaagaccaatatggaggagacaatgtgttcttgtaatgga
caaattgtgctgataaatgggtatgaatttgctttcatatcattgttagcttctgaaaat
gatgtcaggattccagagtctttgccttgtcttcacgataaggtccttgcagcttctgcc
aatcctgccaatatattccaaggtactgtccctgcatttttcagtggacttgtaaagggc
ttcaaaggtnttaaagagcacaatgtggatttgcctggccctgaagttggtatccataat
tgtgaccacctagataccatattttcttatccaccattcttaaagccttccaaggatgac
caaaatgtcgtggagcttaacttagatgacatcaagattgatgaacctcttgttgtctca
tcttcatctcgaaagagcaagaatgatgagaaagataagagaatgaaaaaggaaaaattg
tttgaaggtgcaaatactgaaacaaaaccaaaaccaagaacagttgaagaaattaaggct
aaatatagaaaacctggggatgcattttcagcagctgcagaggcaaggaacaagcttgca
gaacgccaagaaaaactcgagaaactccgtgataatactgaagagctacaggacggagct
cagaattttgctgatatggcaagtgaacttgccaaggcaatggagaaacgtaaatggtgg
aaactatga
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