Mangifera indica (mango): 123192418
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Entry
123192418 CDS
T07684
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123192418
Transcription factors [BR:
minc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123192418
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
123192418
NCBI-ProteinID:
XP_044460894
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Position
12:10908478..10911257
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AA seq
340 aa
AA seq
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MMVNSGNAQFPLPTAVTPTTSTTLPSTTVSNAKQWPPPPPPPLFSHHPTFPPDHASSALL
GLHNILLITPSSSCHHHHHHHHIHEQPPPFSASPGEPSFWSSLKKRHDSATNENNKAHDA
QDDNDNEEEDDHENQNFMKVCKDCGNRAKKECSFSRCRTCCKSRGYDCATHVRSTWIPAS
KRRDKKLAMDGRSSASASSSSGAKRSRIPVPALSSDNLTTTTSSDFHLPTLCFTGSVPQD
ASFKKALPGQVKAPAVFRCISVTSISDGEDNEVGYVGRVNISGHVFKGFLYDQGVCNEKN
LFPCISSKTHNMEANSSAKNRDSSSSPIVDPSSTFAASAT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaattcaggtaatgcgcaatttccactaccaactgcggtcaccccaactact
tccactactctaccttccaccaccgtcagcaacgccaagcaatggcctcctcctcctcct
cctcctctcttctcccaccaccccacatttcctcccgaccacgcctcttctgccttgctt
ggcctccacaacatcctcctcatcaccccctcctcctcctgccaccaccaccaccaccac
catcacattcatgaacagccaccacccttctctgcctcccctggcgagcccagcttctgg
agttccctcaagaaacgtcatgattccgccactaatgaaaacaacaaagctcatgatgct
caagatgataatgataacgaagaagaagatgatcatgaaaaccaaaacttcatgaaagtt
tgcaaagattgcggcaacagggccaagaaagagtgcagttttagccggtgtaggacttgc
tgcaagagccgcggttatgactgcgctactcacgtgaggagcacttggatcccagcttca
aaacgcagagacaagaagctcgctatggacggcaggtcttcagcttctgcgtcttcttct
tctggtgctaaaaggtcaagaattcctgttccagctttgtcttctgacaatctcaccacc
accacctcttctgattttcatctccccactctttgtttcaccggctctgtcccccaagat
gcgagcttcaagaaggcattaccggggcaagtgaaggccccggccgttttcaggtgcata
agtgtgacttccattagtgatggagaagataatgaggttggatatgtgggtagagtgaac
atcagtggccatgtttttaaggggtttctttatgaccaaggagtttgtaatgagaagaat
ttgttcccttgcatttcatcaaaaacgcataatatggaagctaattctagtgcaaaaaat
agggactcttcttcttccccaattgttgatccttctagtacttttgcagcctctgccact
tga
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